RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 TCP10Q12799 353 aa11.75□□□□□ -0.53
PTPN18-209ENST00000464576 PPIL2Q13356 520 aa11.75□□□□□ -0.53
PTPN18-209ENST00000464576 APOBEC3HQ6NTF7 200 aaKnown RBP11.75□□□□□ -0.53
PTPN18-209ENST00000464576 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
PTPN18-209ENST00000464576 FGFR2P21802 821 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 PPATQ06203 517 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 ZGPATQ8N5A5 531 aaKnown RBP11.74□□□□□ -0.53
PTPN18-209ENST00000464576 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 ARMC5Q96C12 935 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 API5Q9BZZ5 524 aaKnown RBP11.74□□□□□ -0.53
PTPN18-209ENST00000464576 ZCCHC17Q9NP64 241 aaKnown RBP11.74□□□□□ -0.53
PTPN18-209ENST00000464576 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 CEP290O15078 2479 aa11.74□□□□□ -0.53
PTPN18-209ENST00000464576 IRF6O14896 467 aa11.73□□□□□ -0.53
PTPN18-209ENST00000464576 SEMA3EO15041 775 aa11.73□□□□□ -0.53
PTPN18-209ENST00000464576 TLR2O60603 784 aa11.73□□□□□ -0.53
PTPN18-209ENST00000464576 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
PTPN18-209ENST00000464576 GNRH1P01148 92 aa11.73□□□□□ -0.53
PTPN18-209ENST00000464576 HOXD10P28358 340 aa11.73□□□□□ -0.53
PTPN18-209ENST00000464576 IL15P40933 162 aaPredicted RBP11.73□□□□□ -0.53
PTPN18-209ENST00000464576 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
PTPN18-209ENST00000464576 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
PTPN18-209ENST00000464576 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.73□□□□□ -0.53
PTPN18-209ENST00000464576 USP40Q9NVE5 1235 aa11.73□□□□□ -0.53
PTPN18-209ENST00000464576 SNCAIPQ9Y6H5 919 aa11.73□□□□□ -0.53
PTPN18-209ENST00000464576 RBBP6Q7Z6E9 1792 aaKnown RBP11.72□□□□□ -0.53
PTPN18-209ENST00000464576 RPAP1Q9BWH6 1393 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-209ENST00000464576 BTBD19C9JJ37 291 aa11.72□□□□□ -0.53
PTPN18-209ENST00000464576 CIAO1O76071 339 aa11.72□□□□□ -0.53
PTPN18-209ENST00000464576 CT47B1P0C2W7 299 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-209ENST00000464576 EN2P19622 333 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-209ENST00000464576 PRMT2P55345 433 aa11.72□□□□□ -0.53
PTPN18-209ENST00000464576 LACTBP83111 547 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-209ENST00000464576 DIXDC1Q155Q3 683 aa11.72□□□□□ -0.53
PTPN18-209ENST00000464576 CDC42EP5Q6NZY7 148 aa11.72□□□□□ -0.53
PTPN18-209ENST00000464576 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
PTPN18-209ENST00000464576 PICK1Q9NRD5 415 aa11.72□□□□□ -0.53
PTPN18-209ENST00000464576 NOB1Q9ULX3 412 aaKnown RBP11.72□□□□□ -0.53
PTPN18-209ENST00000464576 PTCH2Q9Y6C5 1203 aa11.72□□□□□ -0.53
PTPN18-209ENST00000464576 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
PTPN18-209ENST00000464576 MKI67P46013 3256 aaKnown RBP11.71□□□□□ -0.53
PTPN18-209ENST00000464576 PDHXO00330 501 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
PTPN18-209ENST00000464576 INPP5BP32019 993 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
PTPN18-209ENST00000464576 GORABQ5T7V8 394 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 SPTY2D1Q68D10 685 aaPredicted RBP11.71□□□□□ -0.53
PTPN18-209ENST00000464576 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 ZNF333Q96JL9 665 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
PTPN18-209ENST00000464576 ABCF2Q9UG63 623 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 AKAP2Q9Y2D5 859 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 DAGLAQ9Y4D2 1042 aa11.71□□□□□ -0.53
PTPN18-209ENST00000464576 LRRFIP2Q9Y608 721 aaKnown RBP11.71□□□□□ -0.53
PTPN18-209ENST00000464576 GNAI3P08754 354 aa11.7□□□□□ -0.54
PTPN18-209ENST00000464576 PRDX5P30044 214 aa11.7□□□□□ -0.54
PTPN18-209ENST00000464576 ANKRD23Q86SG2 305 aa11.7□□□□□ -0.54
PTPN18-209ENST00000464576 RAET1EQ8TD07 263 aa11.7□□□□□ -0.54
PTPN18-209ENST00000464576 SH3TC2Q8TF17 1288 aa11.7□□□□□ -0.54
PTPN18-209ENST00000464576 CPA4Q9UI42 421 aa11.7□□□□□ -0.54
PTPN18-209ENST00000464576 PSMC4P43686 418 aa11.69□□□□□ -0.54
PTPN18-209ENST00000464576 PHKA1P46020 1223 aa11.69□□□□□ -0.54
PTPN18-209ENST00000464576 NFIAQ12857 509 aa11.69□□□□□ -0.54
PTPN18-209ENST00000464576 FASTKD5Q7L8L6 764 aaKnown RBP11.69□□□□□ -0.54
PTPN18-209ENST00000464576 NEUROD6Q96NK8 337 aa11.69□□□□□ -0.54
PTPN18-209ENST00000464576 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
PTPN18-209ENST00000464576 ARHGAP39Q9C0H5 1083 aa11.69□□□□□ -0.54
PTPN18-209ENST00000464576 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
PTPN18-209ENST00000464576 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 CXCL11O14625 94 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
PTPN18-209ENST00000464576 SRGAP3O43295 1099 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 RGS3P49796 1198 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 PICALMQ13492 652 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 MVPQ14764 893 aaKnown RBP11.68□□□□□ -0.54
PTPN18-209ENST00000464576 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 GADL1Q6ZQY3 521 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 ZHX2Q9Y6X8 837 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 BRCA2P51587 3418 aa11.68□□□□□ -0.54
PTPN18-209ENST00000464576 DOCK2Q92608 1830 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 ENTPD3O75355 529 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 LDHCP07864 332 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 FCGRTP55899 365 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 TIMM10P62072 90 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 UBXN2AP68543 259 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 GSTO1P78417 241 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 NOL10Q9BSC4 688 aaKnown RBP11.67□□□□□ -0.54
PTPN18-209ENST00000464576 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 SRRDQ9UH36 339 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 KCNH4Q9UQ05 1017 aa11.67□□□□□ -0.54
PTPN18-209ENST00000464576 MYPNQ86TC9 1320 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms