RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 LMBR1LQ6UX01 489 aa11.42□□□□□ -0.58
SRRM1-205ENST00000462710 FASTKD5Q7L8L6 764 aaKnown RBP11.42□□□□□ -0.58
SRRM1-205ENST00000462710 VGLL2Q8N8G2 317 aa11.42□□□□□ -0.58
SRRM1-205ENST00000462710 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
SRRM1-205ENST00000462710 FKBP5Q13451 457 aaPredicted RBP11.41□□□□□ -0.58
SRRM1-205ENST00000462710 APOBEC3HQ6NTF7 200 aaKnown RBP11.41□□□□□ -0.58
SRRM1-205ENST00000462710 CHRDL2Q6WN34 429 aa11.41□□□□□ -0.58
SRRM1-205ENST00000462710 TMEM39BQ9GZU3 492 aa11.41□□□□□ -0.58
SRRM1-205ENST00000462710 SPINK5Q9NQ38 1064 aaPredicted RBP11.41□□□□□ -0.58
SRRM1-205ENST00000462710 CNNM1Q9NRU3 951 aa11.41□□□□□ -0.58
SRRM1-205ENST00000462710 FGFR2P21802 821 aa11.41□□□□□ -0.58
SRRM1-205ENST00000462710 PSMC4P43686 418 aa11.41□□□□□ -0.58
SRRM1-205ENST00000462710 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
SRRM1-205ENST00000462710 WDR66Q8TBY9 1149 aa11.41□□□□□ -0.58
SRRM1-205ENST00000462710 ATRNL1Q5VV63 1379 aa11.41□□□□□ -0.58
SRRM1-205ENST00000462710 IRF6O14896 467 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 SEMA3EO15041 775 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 IGSF3O75054 1194 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 FARP2O94887 1054 aaPredicted RBP11.4□□□□□ -0.58
SRRM1-205ENST00000462710 CAVIN4Q5BKX8 364 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 RAET1EQ8TD07 263 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 SH3TC2Q8TF17 1288 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 WRNIP1Q96S55 665 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 PAK6Q9NQU5 681 aaPredicted RBP11.4□□□□□ -0.58
SRRM1-205ENST00000462710 A0A0G2JLL6 359 aaPredicted RBP11.4□□□□□ -0.58
SRRM1-205ENST00000462710 TCP10L2B9ZVM9 353 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 F8W031 263 aaPredicted RBP11.4□□□□□ -0.58
SRRM1-205ENST00000462710 PDHXO00330 501 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 ENTPD3O75355 529 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
SRRM1-205ENST00000462710 PRRT2Q7Z6L0 340 aaPredicted RBP11.4□□□□□ -0.58
SRRM1-205ENST00000462710 CTGFP29279 349 aa11.39□□□□□ -0.59
SRRM1-205ENST00000462710 LRIT3Q3SXY7 679 aa11.39□□□□□ -0.59
SRRM1-205ENST00000462710 FAM109BQ6ICB4 259 aaPredicted RBP11.39□□□□□ -0.59
SRRM1-205ENST00000462710 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
SRRM1-205ENST00000462710 ARHGAP39Q9C0H5 1083 aa11.39□□□□□ -0.59
SRRM1-205ENST00000462710 FANCIQ9NVI1 1328 aa11.39□□□□□ -0.59
SRRM1-205ENST00000462710 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
SRRM1-205ENST00000462710 IDI2Q9BXS1 227 aa11.39□□□□□ -0.59
SRRM1-205ENST00000462710 U2AF1L4Q8WU68 220 aaKnown RBP11.39□□□□□ -0.59
SRRM1-205ENST00000462710 TBC1D12O60347 775 aa11.38□□□□□ -0.59
SRRM1-205ENST00000462710 PDE8BO95263 885 aa11.38□□□□□ -0.59
SRRM1-205ENST00000462710 TRMT44Q8IYL2 757 aaKnown RBP11.38□□□□□ -0.59
SRRM1-205ENST00000462710 DPF3Q92784 378 aa11.38□□□□□ -0.59
SRRM1-205ENST00000462710 GDF15Q99988 308 aa11.38□□□□□ -0.59
SRRM1-205ENST00000462710 STXBP5LQ9Y2K9 1186 aa11.38□□□□□ -0.59
SRRM1-205ENST00000462710 GYG1P46976 350 aa11.38□□□□□ -0.59
SRRM1-205ENST00000462710 MTFR1Q15390 333 aa11.38□□□□□ -0.59
SRRM1-205ENST00000462710 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
SRRM1-205ENST00000462710 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
SRRM1-205ENST00000462710 SCYL3Q8IZE3 742 aa11.37□□□□□ -0.59
SRRM1-205ENST00000462710 KAZALD1Q96I82 304 aa11.37□□□□□ -0.59
SRRM1-205ENST00000462710 SRCIN1Q9C0H9 1055 aa11.37□□□□□ -0.59
SRRM1-205ENST00000462710 SNAP23O00161 211 aa11.37□□□□□ -0.59
SRRM1-205ENST00000462710 DLL1O00548 723 aa11.37□□□□□ -0.59
SRRM1-205ENST00000462710 FMNL1O95466 1100 aaPredicted RBP11.37□□□□□ -0.59
SRRM1-205ENST00000462710 IFIT1P09914 478 aaKnown RBP11.37□□□□□ -0.59
SRRM1-205ENST00000462710 PUM3Q15397 648 aaKnown RBP11.37□□□□□ -0.59
SRRM1-205ENST00000462710 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
SRRM1-205ENST00000462710 GINM1Q9NU53 330 aa11.37□□□□□ -0.59
SRRM1-205ENST00000462710 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 GAKO14976 1311 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 CPA4Q9UI42 421 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 AFG3L2Q9Y4W6 797 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 PHF20L1A8MW92 1017 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 ADCY3O60266 1144 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 PROCA1Q8NCQ7 364 aaPredicted RBP11.36□□□□□ -0.59
SRRM1-205ENST00000462710 SUCLG2Q96I99 432 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 RNF208Q9H0X6 261 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
SRRM1-205ENST00000462710 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
SRRM1-205ENST00000462710 CIAO1O76071 339 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 GCLCP48506 637 aaPredicted RBP11.35□□□□□ -0.59
SRRM1-205ENST00000462710 ZGPATQ8N5A5 531 aaKnown RBP11.35□□□□□ -0.59
SRRM1-205ENST00000462710 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 SLC17A8Q8NDX2 589 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 ZKSCAN4Q969J2 545 aaPredicted RBP11.35□□□□□ -0.59
SRRM1-205ENST00000462710 ZNF594Q96JF6 807 aaPredicted RBP11.35□□□□□ -0.59
SRRM1-205ENST00000462710 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
SRRM1-205ENST00000462710 PTPRCP08575 1304 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 CTNND1O60716 968 aaKnown RBP11.35□□□□□ -0.59
SRRM1-205ENST00000462710 PRKCZQ05513 592 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 GRIK5Q16478 980 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 FAM110CQ1W6H9 321 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 NECAB2Q7Z6G3 386 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 LPIN2Q92539 896 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 UNC93B1Q9H1C4 597 aa11.35□□□□□ -0.59
SRRM1-205ENST00000462710 EVI5O60447 810 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 SLC5A1P13866 664 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 DDX10Q13206 875 aaKnown RBP11.34□□□□□ -0.59
SRRM1-205ENST00000462710 SH3D19Q5HYK7 790 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 VPS37DQ86XT2 251 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 GTF3C2Q8WUA4 911 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-205ENST00000462710 OSBPL5Q9H0X9 879 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-205ENST00000462710 AGTPBP1Q9UPW5 1226 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 DAGLAQ9Y4D2 1042 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 MAST2Q6P0Q8 1798 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 INPP5BP32019 993 aa11.34□□□□□ -0.59
SRRM1-205ENST00000462710 PABPC4Q13310 644 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms