RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	TMEM116	Q8NCL8	245 aa		7.52	□□□□□ -1.21
PHGDH-222	ENST00000641587	ZNF502	Q8TBZ5	544 aa		7.52	□□□□□ -1.21
PHGDH-222	ENST00000641587	ST8SIA2	Q92186	375 aa		7.52	□□□□□ -1.21
PHGDH-222	ENST00000641587	TXN2	Q99757	166 aa		7.52	□□□□□ -1.21
PHGDH-222	ENST00000641587	RSG1	Q9BU20	258 aa		7.52	□□□□□ -1.21
PHGDH-222	ENST00000641587	KCNIP2	Q9NS61	270 aa		7.52	□□□□□ -1.21
PHGDH-222	ENST00000641587	KLK9	Q9UKQ9	250 aa		7.52	□□□□□ -1.21
PHGDH-222	ENST00000641587	HECTD4	Q9Y4D8	3996 aa		7.52	□□□□□ -1.21
PHGDH-222	ENST00000641587	VPS13D	Q5THJ4	4388 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	TRAV30	A0A087WSZ9	112 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	ZNF785	A8K8V0	405 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	BMPR1B	O00238	502 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	AGPAT2	O15120	278 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	NUPL2	O15504	423 aa	Known RBP	7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	MPDU1	O75352	247 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	FABP1	P07148	127 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	ATP6V0C	P27449	155 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	ARL3	P36405	182 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	ELL	P55199	621 aa	Predicted RBP	7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	CYP2G1P	Q6ZSU1	146 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	BAP18	Q8IXM2	172 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	THAP8	Q8NA92	274 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	STOML3	Q8TAV4	291 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	GNPNAT1	Q96EK6	184 aa	Predicted RBP	7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	CCDC140	Q96MF4	163 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	MGST2	Q99735	147 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	NPCDR1	Q9BY65	106 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	PARD6G	Q9BYG4	376 aa	Predicted RBP	7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	SH3BGRL3	Q9H299	93 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	SLC25A32	Q9H2D1	315 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	SIGLEC8	Q9NYZ4	499 aa		7.51	□□□□□ -1.21
PHGDH-222	ENST00000641587	IGKV1OR2-108	A0A075B7D4	117 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	OR11H12	B2RN74	326 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	PPP5D1	E7EU14	171 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	CLEC3B	P05452	202 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	IGLC1	P0CG04	106 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	MIC13	Q5XKP0	118 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	EIF5AL1	Q6IS14	154 aa	Known RBP	7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	OR2G3	Q8NGZ4	309 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	TMED6	Q8WW62	240 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	TRGV9	Q99603	122 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	GINS3	Q9BRX5	216 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	GGTLC1	Q9BX51	225 aa		7.5	□□□□□ -1.21
PHGDH-222	ENST00000641587	KIAA1109	Q2LD37	5005 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	IGKV1D-37	A0A075B6S9	117 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	IGHV3-35	A0A0C4DH35	117 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	TGOLN2	O43493	480 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	GATA2	P23769	480 aa	Predicted RBP	7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	FCGR2B	P31994	310 aa	Predicted RBP	7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	SELENOT	P62341	195 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	ZNF90	Q03938	601 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	GUCA2B	Q16661	112 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	FAM209B	Q5JX69	171 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	FFAR4	Q5NUL3	377 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	SPSB3	Q6PJ21	355 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	ALKAL2	Q6UX46	152 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	TMEM182	Q6ZP80	229 aa	Predicted RBP	7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	RPP25L	Q8N5L8	163 aa	Known RBP	7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	STPG3	Q8N7X2	389 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	BPIFC	Q8NFQ6	507 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	OR2K2	Q8NGT1	345 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	DYNLRB2	Q8TF09	96 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	CHRDL1	Q9BU40	450 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	ARV1	Q9H2C2	271 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	PEMT	Q9UBM1	199 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	TIMM9	Q9Y5J7	89 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	RFNG	Q9Y644	331 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	PXMP4	Q9Y6I8	212 aa		7.49	□□□□□ -1.21
PHGDH-222	ENST00000641587	DNAH6	Q9C0G6	4158 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	CXorf65	A6NEN9	183 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587		F8W735	103 aa	Predicted RBP	7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	YIF1A	O95070	293 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	IGKV1-17	P01599	117 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	CTSG	P08311	255 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	LINC00869	P0C866	280 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	RD3L	P0DJH9	198 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	SPP1	P10451	314 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	LYZ	P61626	148 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	B2M	P61769	119 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	REL	Q04864	619 aa	Predicted RBP	7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	DEFB114	Q30KQ6	69 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	AKR1C8P	Q5T2L2	129 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	ZNF600	Q6ZNG1	722 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587		Q8WTZ3	238 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	ATP6V0B	Q99437	205 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	OVOL2	Q9BRP0	275 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	PSMG3	Q9BT73	122 aa	Predicted RBP	7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	PBDC1	Q9BVG4	233 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	SLC39A9	Q9NUM3	307 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	DOK5	Q9P104	306 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	SLC45A2	Q9UMX9	530 aa		7.48	□□□□□ -1.21
PHGDH-222	ENST00000641587	C2orf70	A6NJV1	201 aa		7.47	□□□□□ -1.21
PHGDH-222	ENST00000641587	COX7A2P2	O60397	106 aa		7.47	□□□□□ -1.21
PHGDH-222	ENST00000641587	GGCT	O75223	188 aa	Known RBP	7.47	□□□□□ -1.21
PHGDH-222	ENST00000641587	TOMM40	O96008	361 aa		7.47	□□□□□ -1.21
PHGDH-222	ENST00000641587	CFD	P00746	253 aa	Predicted RBP	7.47	□□□□□ -1.21
PHGDH-222	ENST00000641587	IFNA7	P01567	189 aa		7.47	□□□□□ -1.21
PHGDH-222	ENST00000641587	OR5G3	P0C626	314 aa		7.47	□□□□□ -1.21
PHGDH-222	ENST00000641587	SEC11B	P0C7V7	166 aa		7.47	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms