RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 PKD1P98161 4303 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 DEFB131BA0A096LNP1 70 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 TMEM189A5PLL7 270 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 SNRPGP15A8MWD9 76 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 CFDP00746 253 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 PAX9P55771 341 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 LYZP61626 148 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF79Q15937 498 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 GDF5OSQ5U4N7 250 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 SAMD13Q5VXD3 122 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 MCFD2Q8NI22 146 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 WDR12Q9GZL7 423 aaKnown RBP8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 SLC45A2Q9UMX9 530 aa8.94□□□□□ -0.98
SOX2-OT-247ENST00000628347 IGKV1OR2-108A0A075B7D4 117 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 LOC100996750A0A140TA64 210 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 PRSS46E5RG02 174 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 ISLRO14498 428 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 MED6O75586 246 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 TOMM5Q8N4H5 51 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF709Q8N972 641 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 CIB3Q96Q77 187 aaPredicted RBP8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 SLC25A21Q9BQT8 299 aaPredicted RBP8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 KRTAP4-6Q9BYQ5 205 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 TMED3Q9Y3Q3 217 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 KIAA1109Q2LD37 5005 aa8.93□□□□□ -0.98
SOX2-OT-247ENST00000628347 TEX48A0A1B0GUV7 120 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 A8MTW9 85 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 SFT2D2O95562 160 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 P0DMU3 169 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 FAM231AP0DMU4 169 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 FAM231CP0DMU5 169 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 IAPPP10997 89 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 MEOX2P50222 304 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 DEFB1P60022 68 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 RPP30P78346 268 aaKnown RBP8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 GGNBP1Q5YKI7 109 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 LINC00336Q6ZUF6 198 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF767PQ75MW2 155 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 TMED4Q7Z7H5 227 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 COQ8AQ8NI60 647 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 LINC00052Q96N35 136 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 NDUFAF3Q9BU61 184 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 RFNGQ9Y644 331 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 V9GYH0 126 aa8.92□□□□□ -0.98
SOX2-OT-247ENST00000628347 A0A0J9YX75 114 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 SYNGR2O43760 224 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 PSG9Q00887 426 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 OR2F1Q13607 317 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 PYDC2Q56P42 97 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 OR8I2Q8N0Y5 310 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 POM121L12Q8N7R1 296 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 PPP1R14BQ96C90 147 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 FAM210BQ96KR6 192 aa8.91□□□□□ -0.98
SOX2-OT-247ENST00000628347 IGKV3-20P01619 116 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 VAMP1P23763 118 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 GALR1P47211 349 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 FXYD7P58549 80 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 UBE2MP61081 183 aaKnown RBP8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 PPP1R1AQ13522 171 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 OXA1LQ15070 435 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 EBLN2Q6P2I7 272 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 OR4B1Q8NGF8 309 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 OR4D5Q8NGN0 318 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 C17orf77Q96MU5 243 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 GPR82Q96P67 336 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 SLC25A32Q9H2D1 315 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 RPRMQ9NS64 109 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 GOLT1BQ9Y3E0 138 aa8.9□□□□□ -0.98
SOX2-OT-247ENST00000628347 ZNF98A6NK75 572 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 S100A7P31151 101 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 FAM78BQ5VT40 261 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 CCDC190Q86UF4 302 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 C1orf158Q8N1D5 194 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 BPIFCQ8NFQ6 507 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 OR1B1Q8NGR6 318 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 C16orf92Q96LL3 132 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 SCRT1Q9BWW7 348 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 SLC35B3Q9H1N7 401 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 DOK5Q9P104 306 aa8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 PAIP2BQ9ULR5 123 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-247ENST00000628347 IGHV3OR16-12A0A075B7B8 117 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 F6UB75 175 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 WRBO00258 174 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 HOXB5P09067 269 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 S100A5P33763 92 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 AMTNQ6UX39 209 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 C20orf173Q96LM9 149 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 NIPSNAP3BQ9BS92 247 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 KRTAP17-1Q9BYP8 105 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 MAGT1Q9H0U3 335 aa8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 STRAPQ9Y3F4 350 aaKnown RBP8.88□□□□□ -0.99
SOX2-OT-247ENST00000628347 A0A1B0GVY2 172 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 HBE1P02100 147 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 EMP1P54849 157 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 ID3Q02535 119 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 LGALS9BQ3B8N2 356 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 SPANXN5Q5MJ07 72 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms