RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TM2D1Q9BX74 207 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 MAP1LC3CQ9BXW4 147 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 SLC35B3Q9H1N7 401 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 GNG12Q9UBI6 72 aa6.67□□□□□ -1.34
GPC6-202ENST00000617456 TRBV6-6A0A0A6YYG2 114 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 A0A1W2PP11 408 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 GAGE12HA6NDE8 117 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 NCBP2LA6PVI3 153 aaKnown RBP6.66□□□□□ -1.34
GPC6-202ENST00000617456 J3QR89 54 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 K7EPK0 472 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 MAS1P04201 325 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 ZNF134P52741 427 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 RPS16P62249 146 aaKnown RBP6.66□□□□□ -1.34
GPC6-202ENST00000617456 SMAGPQ0VAQ4 97 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 DIAPH2-AS1Q14236 149 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 ZNF260Q3ZCT1 412 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 PDZD11Q5EBL8 140 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 CT45A1Q5HYN5 189 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 TMEM78Q5T7P6 136 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 ADAMTSL5Q6ZMM2 481 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 Q8N9W7 124 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 LFNGQ8NES3 379 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 OR1B1Q8NGR6 318 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 CT45A3Q8NHU0 189 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 LEAP2Q969E1 77 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 PTX4Q96A99 478 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 S1PR3Q99500 378 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 RNF5Q99942 180 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 RASL11BQ9BPW5 248 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 VAMP8Q9BV40 100 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 TMEM126AQ9H061 195 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 ABRACLQ9P1F3 81 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 NAT8BQ9UHF3 227 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 ZNF256Q9Y2P7 627 aaPredicted RBP6.66□□□□□ -1.34
GPC6-202ENST00000617456 SMAD5-AS1Q9Y6J3 95 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 LYSTQ99698 3801 aa6.66□□□□□ -1.34
GPC6-202ENST00000617456 LINC01548A6NM66 108 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 UMAD1C9J7I0 102 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 TAAR5O14804 337 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 ARL6IP5O75915 188 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 NAPSAO96009 420 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 GHRHP01286 108 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 IGHV3-7P01780 117 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 C8orf88P0DMB2 117 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 IGLC2P0DOY2 106 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 IGLC3P0DOY3 106 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 UCP3P55916 312 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 TCTAP57738 103 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 PRR20EP86478 221 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 PRR20CP86479 221 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 PRR20DP86480 221 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 PRR20BP86481 221 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 PRR20AP86496 221 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 HIST1H1AQ02539 215 aaPredicted RBP6.65□□□□□ -1.34
GPC6-202ENST00000617456 CFHR3Q02985 330 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 KIR2DS1Q14954 304 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 BATFQ16520 125 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 CXorf66Q5JRM2 361 aaPredicted RBP6.65□□□□□ -1.34
GPC6-202ENST00000617456 AADACL3Q5VUY0 350 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 ZNF880Q6PDB4 577 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 UNQ5815/PRO19632Q6UWF5 114 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 GTF2H5Q6ZYL4 71 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 MOB1BQ7L9L4 216 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 DEFB125Q8N687 156 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 TMEM217Q8N7C4 229 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 OR4X1Q8NH49 305 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 MRPL30Q8TCC3 161 aaKnown RBP6.65□□□□□ -1.34
GPC6-202ENST00000617456 TMEM170AQ8WVE7 144 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 WDR89Q96FK6 387 aaPredicted RBP6.65□□□□□ -1.34
GPC6-202ENST00000617456 MS4A10Q96PG2 267 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 ST6GALNAC5Q9BVH7 336 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 TMEM231Q9H6L2 316 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 CYTL1Q9NRR1 136 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 ZNF581Q9P0T4 197 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 ETV7Q9Y603 341 aa6.65□□□□□ -1.34
GPC6-202ENST00000617456 BORCS7-ASMTA0A0B4J1R7 106 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 A0A1W2PPK0 400 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 TMEM14DPA8MWL7 114 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 TAX1BP3O14907 124 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 AGPAT2O15120 278 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 HLA-DRB1P01911 266 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 AMTP48728 403 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 INSL3P51460 131 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 HNRNPA3P51991 378 aaKnown RBP6.64□□□□□ -1.35
GPC6-202ENST00000617456 PAX9P55771 341 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 YPEL3P61236 119 aaPredicted RBP6.64□□□□□ -1.35
GPC6-202ENST00000617456 QRFPP83859 136 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 ZNF833PQ6ZTB9 187 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 NPBQ8NG41 125 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 OR10G4Q8NGN3 311 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 OR9G4Q8NGQ1 327 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 LGALS14Q8TCE9 139 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 MYOZ3Q8TDC0 251 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 SECTM1Q8WVN6 248 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 GRAMD2BQ96HH9 432 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 DNAJC30Q96LL9 226 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 CABLES2Q9BTV7 478 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 TMEM59Q9BXS4 323 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
GPC6-202ENST00000617456 ZMAT4Q9H898 229 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms