RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 CEMP1Q6PRD7 247 aaPredicted RBP9.21□□□□□ -0.94
UPF1-203ENST00000594504 Q6ZWC4 215 aa9.21□□□□□ -0.94
UPF1-203ENST00000594504 TCF24Q7RTU0 167 aa9.21□□□□□ -0.94
UPF1-203ENST00000594504 GRAMD2BQ96HH9 432 aa9.21□□□□□ -0.94
UPF1-203ENST00000594504 PBDC1Q9BVG4 233 aa9.21□□□□□ -0.94
UPF1-203ENST00000594504 NPVFQ9HCQ7 196 aa9.21□□□□□ -0.94
UPF1-203ENST00000594504 PFDN2Q9UHV9 154 aa9.21□□□□□ -0.94
UPF1-203ENST00000594504 RABAC1Q9UI14 185 aa9.21□□□□□ -0.94
UPF1-203ENST00000594504 U3KQE9 123 aa9.21□□□□□ -0.94
UPF1-203ENST00000594504 IGKV3-7A0A075B6H7 116 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 IGHV3-66A0A0C4DH42 116 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 FAM24AA6NFZ4 105 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 DFFBO76075 338 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 P2RY1P47900 373 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 TFPI2P48307 235 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 EIF2B2P49770 351 aaKnown RBP9.2□□□□□ -0.94
UPF1-203ENST00000594504 SULT1A1P50225 295 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 LYZP61626 148 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 PAFAH1B2P68402 229 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 SLC38A11Q08AI6 406 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 OR2F1Q13607 317 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 LRRC37A5PQ49AS3 106 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 STX12Q86Y82 276 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 LILRB2Q8N423 598 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 TMEM252Q8N6L7 170 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 STPG3Q8N7X2 389 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 BPIFCQ8NFQ6 507 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 RNF183Q96D59 192 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 TP53TG1Q9Y2A0 90 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
UPF1-203ENST00000594504 NUPR2A6NF83 97 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 E5RGE8 158 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 UBE2CO00762 179 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 CST7O76096 145 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 PET100P0DJ07 73 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 TEPPQ6URK8 271 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 C16orf54Q6UWD8 224 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 CYP2G1PQ6ZSU1 146 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 PPP1R1CQ8WVI7 109 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 MAP6D1Q9H9H5 199 aa9.19□□□□□ -0.94
UPF1-203ENST00000594504 TRAV2A0A0B4J234 112 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 IGSF23A1L1A6 192 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 HELTA6NFD8 242 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 DNASE2O00115 360 aaPredicted RBP9.18□□□□□ -0.94
UPF1-203ENST00000594504 BUB3O43684 328 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 S100A11P31949 105 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 SELENOTP62341 195 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 RPL11P62913 178 aaKnown RBP9.18□□□□□ -0.94
UPF1-203ENST00000594504 HBG1P69891 147 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 HBG2P69892 147 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 OXA1LQ15070 435 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 GBGT1Q8N5D6 347 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 RPP25LQ8N5L8 163 aaKnown RBP9.18□□□□□ -0.94
UPF1-203ENST00000594504 TMEM217Q8N7C4 229 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 GLMPQ8WWB7 406 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 SLC25A31Q9H0C2 315 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 MED28Q9H204 178 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 OR5AC2Q9NZP5 309 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 SLC45A2Q9UMX9 530 aa9.18□□□□□ -0.94
UPF1-203ENST00000594504 KIR2DL5BA0A0G2JN68 375 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 KIR2DL5BA0A0G2JPC4 375 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 H0YIZ8 118 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 MPC2O95563 127 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 CXCL3P19876 107 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 GATA2P23769 480 aaPredicted RBP9.17□□□□□ -0.94
UPF1-203ENST00000594504 AP2S1P53680 142 aaPredicted RBP9.17□□□□□ -0.94
UPF1-203ENST00000594504 CMC4P56277 68 aaPredicted RBP9.17□□□□□ -0.94
UPF1-203ENST00000594504 ATP6V1FQ16864 119 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 VWC2Q2TAL6 325 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 C1orf194Q5T5A4 169 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 TMEM182Q6ZP80 229 aaPredicted RBP9.17□□□□□ -0.94
UPF1-203ENST00000594504 KIR2DL5AQ8N109 375 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 KIR2DL5BQ8NHK3 375 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 TMEM147Q9BVK8 224 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 UQCC1Q9NVA1 299 aa9.17□□□□□ -0.94
UPF1-203ENST00000594504 LINC00869P0C866 280 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 S100A7P31151 101 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 PLP1P60201 277 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 BAXQ07812 192 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 FCN2Q15485 313 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 SIGLEC15Q6ZMC9 328 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 ZNF546Q86UE3 836 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 STXBP6Q8NFX7 210 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 PHLDA1Q8WV24 401 aaPredicted RBP9.16□□□□□ -0.94
UPF1-203ENST00000594504 PPP1R14BQ96C90 147 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 RNF126Q9BV68 326 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 CSTL1Q9H114 145 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 FBXL17Q9UF56 701 aa9.16□□□□□ -0.94
UPF1-203ENST00000594504 AGPAT2O15120 278 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 ORM2P19652 201 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 NANOS2P60321 138 aaKnown RBP9.15□□□□□ -0.94
UPF1-203ENST00000594504 RAB31Q13636 194 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 OR11H7Q8NGC8 314 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 OR1B1Q8NGR6 318 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 ASB13Q8WXK3 278 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 MGST2Q99735 147 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 RARRES2Q99969 163 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 WDR83OSQ9Y284 106 aa9.15□□□□□ -0.94
UPF1-203ENST00000594504 KLK5Q9Y337 293 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms