RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PRR20BP86481 221 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 PRR20AP86496 221 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 RPL7L1Q6DKI1 246 aaKnown RBP10.34□□□□□ -0.75
VMP1-210ENST00000589823 TMUB2Q71RG4 321 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 RSG1Q9BU20 258 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 RHPN1-AS1Q9BWJ2 59 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 TECRQ9NZ01 308 aaKnown RBP10.34□□□□□ -0.75
VMP1-210ENST00000589823 DOK5Q9P104 306 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 VWFP04275 2813 aa10.34□□□□□ -0.75
VMP1-210ENST00000589823 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
VMP1-210ENST00000589823 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 CHEK1O14757 476 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 BCL2L11O43521 198 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 HSD17B11Q8NBQ5 300 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 OR1L4Q8NGR5 311 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 HIGD1AQ9Y241 93 aa10.33□□□□□ -0.76
VMP1-210ENST00000589823 IGHV3-66A0A0C4DH42 116 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
VMP1-210ENST00000589823 LGALSLQ3ZCW2 172 aaPredicted RBP10.32□□□□□ -0.76
VMP1-210ENST00000589823 OXLD1Q5BKU9 147 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 OR2K2Q8NGT1 345 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 ST8SIA2Q92186 375 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 GNPNAT1Q96EK6 184 aaPredicted RBP10.32□□□□□ -0.76
VMP1-210ENST00000589823 PFDN5Q99471 154 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 ZNF471Q9BX82 626 aaPredicted RBP10.32□□□□□ -0.76
VMP1-210ENST00000589823 ARV1Q9H2C2 271 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 VSIRQ9H7M9 311 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 MLXQ9UH92 298 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 TIMM9Q9Y5J7 89 aa10.32□□□□□ -0.76
VMP1-210ENST00000589823 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 CD5P06127 495 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 C4BPBP20851 252 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 ATP6V0CP27449 155 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 EIF5AP63241 154 aaKnown RBP10.31□□□□□ -0.76
VMP1-210ENST00000589823 DEFB114Q30KQ6 69 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 FFAR4Q5NUL3 377 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 C10orf113Q5VZT2 155 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 LAMTOR1Q6IAA8 161 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 ZMAT5Q9UDW3 170 aaKnown RBP10.31□□□□□ -0.76
VMP1-210ENST00000589823 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 U3KQE9 123 aa10.31□□□□□ -0.76
VMP1-210ENST00000589823 G3V4G9 280 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 WIPF1O43516 503 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 BUB3O43684 328 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 CD300EQ496F6 205 aaPredicted RBP10.3□□□□□ -0.76
VMP1-210ENST00000589823 LCN12Q6JVE5 192 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 C16orf54Q6UWD8 224 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 PATE2Q6UY27 113 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 RBPMS2Q6ZRY4 209 aaKnown RBP10.3□□□□□ -0.76
VMP1-210ENST00000589823 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 C9orf62Q8N4C0 152 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 GATAD1Q8WUU5 269 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 RNF2Q99496 336 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 PSMG3Q9BT73 122 aaPredicted RBP10.3□□□□□ -0.76
VMP1-210ENST00000589823 SLC25A39Q9BZJ4 359 aaPredicted RBP10.3□□□□□ -0.76
VMP1-210ENST00000589823 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
VMP1-210ENST00000589823 TRAV25A0A0B4J276 109 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 ZNF98A6NK75 572 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 H3BRN7 92 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 NKX2-5P52952 324 aaPredicted RBP10.29□□□□□ -0.76
VMP1-210ENST00000589823 RPL11P62913 178 aaKnown RBP10.29□□□□□ -0.76
VMP1-210ENST00000589823 SERF2P84101 59 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 ACOT6Q3I5F7 207 aaPredicted RBP10.29□□□□□ -0.76
VMP1-210ENST00000589823 C1orf194Q5T5A4 169 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 SAMD5Q5TGI4 173 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 TCF24Q7RTU0 167 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 OR8I2Q8N0Y5 310 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 UHRF2Q96PU4 802 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 SHANK2-AS3Q9BTD1 123 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 SLC25A32Q9H2D1 315 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 SLC25A22Q9H936 323 aa10.29□□□□□ -0.76
VMP1-210ENST00000589823 HELTA6NFD8 242 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 MBP02144 154 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 TPT1P13693 172 aaKnown RBP10.28□□□□□ -0.76
VMP1-210ENST00000589823 M6PRP20645 277 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 PAFAH1B2P68402 229 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 GCSAMLQ5JQS6 135 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 TMEM61Q8N0U2 210 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 OR2G3Q8NGZ4 309 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 GLMPQ8WWB7 406 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 GPR82Q96P67 336 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 SCRT1Q9BWW7 348 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 SH3BGRL3Q9H299 93 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 RFNGQ9Y644 331 aa10.28□□□□□ -0.76
VMP1-210ENST00000589823 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
VMP1-210ENST00000589823 GUCA2BQ16661 112 aa10.27□□□□□ -0.77
VMP1-210ENST00000589823 FAM78BQ5VT40 261 aa10.27□□□□□ -0.77
VMP1-210ENST00000589823 LEMD1Q68G75 181 aa10.27□□□□□ -0.77
VMP1-210ENST00000589823 SIGLEC15Q6ZMC9 328 aa10.27□□□□□ -0.77
VMP1-210ENST00000589823 SLC51BQ86UW2 128 aa10.27□□□□□ -0.77
VMP1-210ENST00000589823 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
VMP1-210ENST00000589823 MRPL32Q9BYC8 188 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms