RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FAM209BQ5JX69 171 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 LINC00305Q7Z4B0 112 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 PRIMA1Q86XR5 153 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 KLHL30-AS1Q8NEE0 82 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 GATAD1Q8WUU5 269 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 C4orf3Q8WVX3 66 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 MBD3L1Q8WWY6 194 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 PFDN5Q99471 154 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 MAP1LC3BQ9GZQ8 125 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 HRH4Q9H3N8 390 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 HIGD1AQ9Y241 93 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 DNHD1Q96M86 4753 aa8.68□□□□□ -1.02
VMP1-207ENST00000588131 ELOA3CA0A087WX78 387 aaPredicted RBP8.67□□□□□ -1.02
VMP1-207ENST00000588131 A0A1W2PRX2 142 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 NDUFA4O00483 81 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 HSPB1P04792 205 aaKnown RBP8.67□□□□□ -1.02
VMP1-207ENST00000588131 CCL20P78556 96 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 UNQ9165/PRO28630Q6UXU0 137 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 C8orf86Q6ZUL3 223 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 LYPD6BQ8NI32 183 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 RNF2Q99496 336 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 C19orf24Q9BVV8 132 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 SCRT1Q9BWW7 348 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 MRPL32Q9BYC8 188 aaKnown RBP8.67□□□□□ -1.02
VMP1-207ENST00000588131 NF1P21359 2839 aa8.67□□□□□ -1.02
VMP1-207ENST00000588131 A0A1B0GUS0 222 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 NUDT19A8MXV4 375 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 H3BRN7 92 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 ZNF207O43670 478 aaKnown RBP8.66□□□□□ -1.02
VMP1-207ENST00000588131 STAG3L2P0CL84 134 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 STAG3L3P0CL85 134 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 KRTAP24-1Q3LI83 254 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 LEMD1Q68G75 181 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 WFDC12Q8WWY7 111 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 TMEM190Q8WZ59 177 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 ZNF503Q96F45 646 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 FAM167A-AS1Q96KT0 104 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 DUX3Q96PT4 197 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 SHANK2-AS3Q9BTD1 123 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 C20orf24Q9BUV8 137 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 SLC25A2Q9BXI2 301 aa8.66□□□□□ -1.02
VMP1-207ENST00000588131 SLC25A39Q9BZJ4 359 aaPredicted RBP8.66□□□□□ -1.02
VMP1-207ENST00000588131 TSSC4Q9Y5U2 329 aaPredicted RBP8.66□□□□□ -1.02
VMP1-207ENST00000588131 FBN3Q75N90 2809 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 TRAV1-1A0A0B4J248 108 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 ADARB2-AS1A8MUL3 147 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 ARL14EPLP0DKL9 152 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 C8orf88P0DMB2 117 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 HOXD3P31249 432 aaPredicted RBP8.65□□□□□ -1.02
VMP1-207ENST00000588131 FOXL1Q12952 345 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 RPEL1Q2QD12 228 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 AWAT1Q58HT5 328 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 GPHB5Q86YW7 130 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 OR11H1Q8NG94 326 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 OR1N2Q8NGR9 330 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 TMPRSS5Q9H3S3 457 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 TECRQ9NZ01 308 aaKnown RBP8.65□□□□□ -1.02
VMP1-207ENST00000588131 RABAC1Q9UI14 185 aa8.65□□□□□ -1.02
VMP1-207ENST00000588131 IGHV3-49A0A0A0MS15 119 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 ZNF320A2RRD8 509 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 LINC00862A6NCI5 91 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 ZNF98A6NK75 572 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 LINC01619G3V211 115 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 HBE1P02100 147 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 APOHP02749 345 aaPredicted RBP8.64□□□□□ -1.03
VMP1-207ENST00000588131 EDN2P20800 178 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 SLURP1P55000 103 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 IQCF2Q8IXL9 164 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 RAX2Q96IS3 184 aa8.64□□□□□ -1.03
VMP1-207ENST00000588131 IGHV3OR16-13A0A075B7E8 117 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 IGHV3-74A0A0B4J1X5 117 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 IGHV3-66A0A0C4DH42 116 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 OR7C2O60412 319 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 CXorf1O96002 111 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 PYYP10082 97 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 CRYBB3P26998 211 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 GCHFRP30047 84 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 SYNJ2BPP57105 145 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 TAS2R45P59539 299 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 FAM106AQ4KMX7 169 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 TM4SF20Q53R12 229 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 KHDC3LQ587J8 217 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 IL34Q6ZMJ4 242 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 REC114Q7Z4M0 266 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 COMMD7Q86VX2 200 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 DPF1Q92782 380 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 METTL26Q96S19 204 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 MED9Q9NWA0 146 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 U3KQE9 123 aa8.63□□□□□ -1.03
VMP1-207ENST00000588131 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
VMP1-207ENST00000588131 BUB3O43684 328 aa8.62□□□□□ -1.03
VMP1-207ENST00000588131 SNRPCP09234 159 aaKnown RBP8.62□□□□□ -1.03
VMP1-207ENST00000588131 OR10J4P0C629 311 aa8.62□□□□□ -1.03
VMP1-207ENST00000588131 GP9P14770 177 aa8.62□□□□□ -1.03
VMP1-207ENST00000588131 ZP3P21754 424 aa8.62□□□□□ -1.03
VMP1-207ENST00000588131 NPPCP23582 126 aa8.62□□□□□ -1.03
VMP1-207ENST00000588131 FHL3Q13643 280 aa8.62□□□□□ -1.03
VMP1-207ENST00000588131 KLF5Q13887 457 aaPredicted RBP8.62□□□□□ -1.03
VMP1-207ENST00000588131 NSUN5P1Q3KNT7 163 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms