RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SIGLEC15Q6ZMC9 328 aa14.29□□□□□ -0.12
SS18-208ENST00000577751 TMEM252Q8N6L7 170 aa14.29□□□□□ -0.12
SS18-208ENST00000577751 DEFB131AP59861 70 aa14.28□□□□□ -0.12
SS18-208ENST00000577751 PLP1P60201 277 aa14.28□□□□□ -0.12
SS18-208ENST00000577751 SELENOTP62341 195 aa14.28□□□□□ -0.12
SS18-208ENST00000577751 KIR2DL5BA0A0G2JN68 375 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 KIR2DL5BA0A0G2JPC4 375 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 IGSF23A1L1A6 192 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 SSNA1O43805 119 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 CST7O76096 145 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 SULT1A1P50225 295 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 SLC38A11Q08AI6 406 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 KIR2DL5AQ8N109 375 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 KIR2DL5BQ8NHK3 375 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 SEPSECSQ9HD40 501 aaKnown RBP14.27□□□□□ -0.13
SS18-208ENST00000577751 NRN1Q9NPD7 142 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 FBXL17Q9UF56 701 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 STAB2Q8WWQ8 2551 aa14.27□□□□□ -0.13
SS18-208ENST00000577751 ORM2P19652 201 aa14.26□□□□□ -0.13
SS18-208ENST00000577751 APOC4P55056 127 aa14.26□□□□□ -0.13
SS18-208ENST00000577751 VWC2Q2TAL6 325 aa14.26□□□□□ -0.13
SS18-208ENST00000577751 RETNQ9HD89 108 aa14.26□□□□□ -0.13
SS18-208ENST00000577751 H0YIZ8 118 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 UBE2CO00762 179 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 AGPAT2O15120 278 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 RLN2P04090 185 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 ZNF688P0C7X2 276 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 S100A11P31949 105 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 LEMD1Q68G75 181 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 TMEM217Q8N7C4 229 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 OR1B1Q8NGR6 318 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 PPP1R14BQ96C90 147 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 ALG5Q9Y673 324 aa14.25□□□□□ -0.13
SS18-208ENST00000577751 ZNF98A6NK75 572 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 E5RGE8 158 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 LINC00869P0C866 280 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 RPL35AP18077 110 aaKnown RBP14.24□□□□□ -0.13
SS18-208ENST00000577751 LRRC37A5PQ49AS3 106 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 Q6ZWC4 215 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 STX12Q86Y82 276 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 OR8I2Q8N0Y5 310 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 PPP1R1CQ8WVI7 109 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 MGST2Q99735 147 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 TMEM147Q9BVK8 224 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 EDA2RQ9HAV5 297 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 OR5AC2Q9NZP5 309 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 WDR83OSQ9Y284 106 aa14.24□□□□□ -0.13
SS18-208ENST00000577751 S100A7P31151 101 aa14.23□□□□□ -0.13
SS18-208ENST00000577751 HBG1P69891 147 aa14.23□□□□□ -0.13
SS18-208ENST00000577751 HBG2P69892 147 aa14.23□□□□□ -0.13
SS18-208ENST00000577751 ZNF546Q86UE3 836 aa14.23□□□□□ -0.13
SS18-208ENST00000577751 OVOL2Q9BRP0 275 aa14.23□□□□□ -0.13
SS18-208ENST00000577751 SLC25A39Q9BZJ4 359 aaPredicted RBP14.23□□□□□ -0.13
SS18-208ENST00000577751 UQCC1Q9NVA1 299 aa14.23□□□□□ -0.13
SS18-208ENST00000577751 NBEAL2Q6ZNJ1 2754 aa14.23□□□□□ -0.13
SS18-208ENST00000577751 H3BRN7 92 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 HYPMO75409 117 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 ATP6V1FQ16864 119 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 PXDC1Q5TGL8 231 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 PATE2Q6UY27 113 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 SHANK2-AS3Q9BTD1 123 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 RNF126Q9BV68 326 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 SLC25A32Q9H2D1 315 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 DOK5Q9P104 306 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 HIGD1AQ9Y241 93 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 TP53TG1Q9Y2A0 90 aa14.22□□□□□ -0.13
SS18-208ENST00000577751 SOCS3O14543 225 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 MPC2O95563 127 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 RAP2BP61225 183 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 SNRPD3P62318 126 aaKnown RBP14.21□□□□□ -0.13
SS18-208ENST00000577751 NHLH2Q02577 135 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 C17orf77Q96MU5 243 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 SCRT1Q9BWW7 348 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 SLC25A31Q9H0C2 315 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 ARL6Q9H0F7 186 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 CSTL1Q9H114 145 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 SLC25A22Q9H936 323 aa14.21□□□□□ -0.13
SS18-208ENST00000577751 AGRNO00468 2067 aa14.2□□□□□ -0.14
SS18-208ENST00000577751 CXCL3P19876 107 aa14.2□□□□□ -0.14
SS18-208ENST00000577751 CAMLGP49069 296 aa14.2□□□□□ -0.14
SS18-208ENST00000577751 EWSR1Q01844 656 aaKnown RBP eCLIP14.2□□□□□ -0.14
SS18-208ENST00000577751 PSMG4Q5JS54 123 aa14.2□□□□□ -0.14
SS18-208ENST00000577751 CHAC2Q8WUX2 184 aa14.2□□□□□ -0.14
SS18-208ENST00000577751 GPR82Q96P67 336 aa14.2□□□□□ -0.14
SS18-208ENST00000577751 OR5G3P0C626 314 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 GALR1P47211 349 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 PRR20EP86478 221 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 PRR20CP86479 221 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 PRR20DP86480 221 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 PRR20BP86481 221 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 PRR20AP86496 221 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 RAB31Q13636 194 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 S100A7AQ86SG5 101 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 TRPT1Q86TN4 253 aaKnown RBP14.19□□□□□ -0.14
SS18-208ENST00000577751 STHQ8IWL8 128 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 RNF183Q96D59 192 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 UHRF2Q96PU4 802 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 ARV1Q9H2C2 271 aa14.19□□□□□ -0.14
SS18-208ENST00000577751 UBE2L5PA0A1B0GUS4 154 aa14.18□□□□□ -0.14
SS18-208ENST00000577751 KNCNA6PVL3 124 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms