RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 HSD17B11Q8NBQ5 300 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 PPP1R14BQ96C90 147 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 RNF125Q96EQ8 232 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 GINS3Q9BRX5 216 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 C20orf24Q9BUV8 137 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 ZNF471Q9BX82 626 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-212ENST00000568539 KCNIP2Q9NS61 270 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 SLC39A9Q9NUM3 307 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 UFC1Q9Y3C8 167 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 TIMM9Q9Y5J7 89 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 RFNGQ9Y644 331 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 PXMP4Q9Y6I8 212 aa6.44□□□□□ -1.38
SF3B3-212ENST00000568539 TMEM213A2RRL7 107 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 ZNF207O43670 478 aaKnown RBP6.43□□□□□ -1.38
SF3B3-212ENST00000568539 ELLP55199 621 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-212ENST00000568539 LYZP61626 148 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 B2MP61769 119 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 TM4SF20Q53R12 229 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 PXDC1Q5TGL8 231 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 IL34Q6ZMJ4 242 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 OR9G4Q8NGQ1 327 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 STOML3Q8TAV4 291 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 GNPNAT1Q96EK6 184 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-212ENST00000568539 PSMG3Q9BT73 122 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-212ENST00000568539 PBDC1Q9BVG4 233 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 SH3BGRL3Q9H299 93 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 DAZ1Q9NQZ3 744 aaKnown RBP6.43□□□□□ -1.38
SF3B3-212ENST00000568539 MRPL27Q9P0M9 148 aaKnown RBP6.43□□□□□ -1.38
SF3B3-212ENST00000568539 PEMTQ9UBM1 199 aa6.43□□□□□ -1.38
SF3B3-212ENST00000568539 MGAM2Q2M2H8 2515 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 C2orf70A6NJV1 201 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 HYPMO75409 117 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 CSN3P07498 182 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 C8orf88P0DMB2 117 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 SPP1P10451 314 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 TPT1P13693 172 aaKnown RBP6.42□□□□□ -1.38
SF3B3-212ENST00000568539 FOLR2P14207 255 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 ORM2P19652 201 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 EDN2P20800 178 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 C4BPBP20851 252 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 CBLN1P23435 193 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 NPPCP23582 126 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 CRYBB3P26998 211 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 EIF5AP63241 154 aaKnown RBP6.42□□□□□ -1.38
SF3B3-212ENST00000568539 PATE2Q6UY27 113 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 ADAMTSL5Q6ZMM2 481 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 Q6ZRG5 221 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 SLC51BQ86UW2 128 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 BAP18Q8IXM2 172 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 OR1B1Q8NGR6 318 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 OR2G3Q8NGZ4 309 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 TMEM37Q8WXS4 190 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 METTL26Q96S19 204 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 SLC25A32Q9H2D1 315 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 DOK5Q9P104 306 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 RABAC1Q9UI14 185 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 U3KQE9 123 aa6.42□□□□□ -1.38
SF3B3-212ENST00000568539 IGHV7-4-1A0A0J9YVY3 117 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 COX7A2P2O60397 106 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 APOHP02749 345 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-212ENST00000568539 OR5G3P0C626 314 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 SEC11BP0C7V7 166 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 SERF2P84101 59 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 GCSAMLQ5JQS6 135 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 FFAR4Q5NUL3 377 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 PRR31Q5SQ13 230 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 OR1L4Q8NGR5 311 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 GATAD1Q8WUU5 269 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 ST8SIA2Q92186 375 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 MARC2Q969Z3 335 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 UHRF2Q96PU4 802 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 PFDN5Q99471 154 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 ELOVL1Q9BW60 279 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 VSIRQ9H7M9 311 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 DNAJC4Q9NNZ3 241 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 SIGLEC8Q9NYZ4 499 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 SMPXQ9UHP9 88 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 HIGD1AQ9Y241 93 aa6.41□□□□□ -1.38
SF3B3-212ENST00000568539 IGHV3OR16-13A0A075B7E8 117 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 IGHV3-49A0A0A0MS15 119 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 IGHV3-74A0A0B4J1X5 117 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 SEC14L6B5MCN3 397 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 H3BRN7 92 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 CHEK1O14757 476 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 BUB3O43684 328 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 M6PRP20645 277 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 MORN5Q5VZ52 161 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 C10orf113Q5VZT2 155 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 SHANK2-AS3Q9BTD1 123 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 RHPN1-AS1Q9BWJ2 59 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 SCRT1Q9BWW7 348 aa6.4□□□□□ -1.38
SF3B3-212ENST00000568539 SLC25A39Q9BZJ4 359 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-212ENST00000568539 SEPSECSQ9HD40 501 aaKnown RBP6.4□□□□□ -1.38
SF3B3-212ENST00000568539 TRRAPQ9Y4A5 3859 aa6.4□□□□□ -1.39
SF3B3-212ENST00000568539 IGHV3-66A0A0C4DH42 116 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 A0A1W2PS18 150 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 ZNF98A6NK75 572 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 SAP30O75446 220 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 MBP02144 154 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms