RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SAV1Q9H4B6 383 aaPredicted RBP8.79□□□□□ -1
GTF3C1-204ENST00000564664 XCL2Q9UBD3 114 aa8.79□□□□□ -1
GTF3C1-204ENST00000564664 TEX48A0A1B0GUV7 120 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 SYNGR2O43760 224 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 VAMP1P23763 118 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 LYZP61626 148 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 C12orf74Q32Q52 190 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 ZNF705AQ6ZN79 300 aaPredicted RBP8.78□□□□□ -1
GTF3C1-204ENST00000564664 Q6ZTC4 211 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 OR8I2Q8N0Y5 310 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 OR4D5Q8NGN0 318 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 LINC00052Q96N35 136 aa8.78□□□□□ -1
GTF3C1-204ENST00000564664 IGHV4-4A0A075B6R2 117 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 DEFB131BA0A096LNP1 70 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 SOCS3O14543 225 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 SPART-AS1P0CW21 52 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 GALR1P47211 349 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 PAX9P55771 341 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 EBLN2Q6P2I7 272 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 COQ8AQ8NI60 647 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 FAM210BQ96KR6 192 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 GPR82Q96P67 336 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 V9GYH0 126 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 FRAS1Q86XX4 4008 aa8.77□□□□□ -1.01
GTF3C1-204ENST00000564664 IGKV1OR2-108A0A075B7D4 117 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 NAP1L6A6NFF2 107 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 ZNF705FA8MVS1 300 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 AMBPP02760 352 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 ZNF705DP0CH99 300 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 ZNF705BP0CI00 300 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 IAPPP10997 89 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 PRR20EP86478 221 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 PRR20CP86479 221 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 PRR20DP86480 221 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 PRR20BP86481 221 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 PRR20AP86496 221 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 PSG9Q00887 426 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 ID3Q02535 119 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 ZNF79Q15937 498 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 SPANXN2Q5MJ10 180 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 CCDC190Q86UF4 302 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 BPIFCQ8NFQ6 507 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 RPRMQ9NS64 109 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 PAIP2BQ9ULR5 123 aaKnown RBP8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 STRAPQ9Y3F4 350 aaKnown RBP8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 RFNGQ9Y644 331 aa8.76□□□□□ -1.01
GTF3C1-204ENST00000564664 ZNF98A6NK75 572 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 PRSS46E5RG02 174 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 WRBO00258 174 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 P0DMU3 169 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 FAM231AP0DMU4 169 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 FAM231CP0DMU5 169 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 PPP1R1AQ13522 171 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 OR2F1Q13607 317 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 S100A7AQ86SG5 101 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 OR4B1Q8NGF8 309 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 OR1B1Q8NGR6 318 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 NDUFAF3Q9BU61 184 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 GOLT1BQ9Y3E0 138 aa8.75□□□□□ -1.01
GTF3C1-204ENST00000564664 A0A0J9YX75 114 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 IFNA21P01568 189 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 HOXB5P09067 269 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 OXA1LQ15070 435 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 SPANXN5Q5MJ07 72 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 GDF5OSQ5U4N7 250 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 TMEM144Q7Z5S9 345 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 C16orf92Q96LL3 132 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 TMEM147Q9BVK8 224 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 MAGT1Q9H0U3 335 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 CELA1Q9UNI1 258 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 RNF24Q9Y225 148 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 VPS13DQ5THJ4 4388 aa8.74□□□□□ -1.01
GTF3C1-204ENST00000564664 C9orf170A2RU37 121 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 A8MTW9 85 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 NDUFB6O95139 128 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 IGKV3-20P01619 116 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 INPP1P49441 399 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 B2MP61769 119 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 SELENOTP62341 195 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 FAM78BQ5VT40 261 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 LINC00336Q6ZUF6 198 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 ZNF709Q8N972 641 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 RSG1Q9BU20 258 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 DOK5Q9P104 306 aa8.73□□□□□ -1.01
GTF3C1-204ENST00000564664 DNAH10Q8IVF4 4471 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 A0A1B0GVG6 124 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 CENPXA8MT69 81 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 FNDC10F2Z333 226 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 DUSP14O95147 198 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 HBE1P02100 147 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 ORM2P19652 201 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 PLP1P60201 277 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 AKR1C1Q04828 323 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 RGS21Q2M5E4 152 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 SMIM8Q96KF7 97 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 C7orf50Q9BRJ6 194 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 NIPSNAP3BQ9BS92 247 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 SRRQ9GZT4 340 aa8.72□□□□□ -1.01
GTF3C1-204ENST00000564664 DKK2Q9UBU2 259 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms