RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZNF705BP0CI00 300 aaPredicted RBP11.65□□□□□ -0.55
SNX1-213ENST00000561026 ZNF79Q15937 498 aa11.65□□□□□ -0.55
SNX1-213ENST00000561026 OR8I2Q8N0Y5 310 aa11.65□□□□□ -0.55
SNX1-213ENST00000561026 THAP8Q8NA92 274 aa11.65□□□□□ -0.55
SNX1-213ENST00000561026 PPP1R14BQ96C90 147 aa11.65□□□□□ -0.55
SNX1-213ENST00000561026 CIB3Q96Q77 187 aaPredicted RBP11.65□□□□□ -0.55
SNX1-213ENST00000561026 SMIM9A6NGZ8 99 aa11.64□□□□□ -0.55
SNX1-213ENST00000561026 SYNGR2O43760 224 aa11.64□□□□□ -0.55
SNX1-213ENST00000561026 RPP30P78346 268 aaKnown RBP11.64□□□□□ -0.55
SNX1-213ENST00000561026 PPP1R1AQ13522 171 aa11.64□□□□□ -0.55
SNX1-213ENST00000561026 COQ8AQ8NI60 647 aa11.64□□□□□ -0.55
SNX1-213ENST00000561026 MAGT1Q9H0U3 335 aa11.64□□□□□ -0.55
SNX1-213ENST00000561026 PRSS46E5RG02 174 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 ISLRO14498 428 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 CFDP00746 253 aaPredicted RBP11.63□□□□□ -0.55
SNX1-213ENST00000561026 AMBPP02760 352 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 S100A5P33763 92 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 FXYD7P58549 80 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 SPATA31B1PQ5VZV4 182 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 GGNBP1Q5YKI7 109 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 GSG1LQ6UXU4 331 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 ZNF709Q8N972 641 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 OR4B1Q8NGF8 309 aa11.63□□□□□ -0.55
SNX1-213ENST00000561026 WRBO00258 174 aa11.62□□□□□ -0.55
SNX1-213ENST00000561026 HOXB5P09067 269 aa11.62□□□□□ -0.55
SNX1-213ENST00000561026 PAX9P55771 341 aa11.62□□□□□ -0.55
SNX1-213ENST00000561026 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
SNX1-213ENST00000561026 CCDC190Q86UF4 302 aa11.62□□□□□ -0.55
SNX1-213ENST00000561026 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 TMEM189A5PLL7 270 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 SPART-AS1P0CW21 52 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 EMP1P54849 157 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 SPANXN5Q5MJ07 72 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 FAM78BQ5VT40 261 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 EBLN2Q6P2I7 272 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 SCRT1Q9BWW7 348 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 SLC35B3Q9H1N7 401 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 SLC45A2Q9UMX9 530 aa11.61□□□□□ -0.55
SNX1-213ENST00000561026 F6UB75 175 aa11.6□□□□□ -0.55
SNX1-213ENST00000561026 GALR1P47211 349 aa11.6□□□□□ -0.55
SNX1-213ENST00000561026 MEOX2P50222 304 aa11.6□□□□□ -0.55
SNX1-213ENST00000561026 PSG9Q00887 426 aa11.6□□□□□ -0.55
SNX1-213ENST00000561026 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
SNX1-213ENST00000561026 NDUFAF3Q9BU61 184 aa11.6□□□□□ -0.55
SNX1-213ENST00000561026 SLC25A32Q9H2D1 315 aa11.6□□□□□ -0.55
SNX1-213ENST00000561026 RFNGQ9Y644 331 aa11.6□□□□□ -0.55
SNX1-213ENST00000561026 HECTD4Q9Y4D8 3996 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 A0A0J9YX75 114 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 CCDC160A6NGH7 325 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 ZNF98A6NK75 572 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 ORM2P19652 201 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 GATA2P23769 480 aaPredicted RBP11.59□□□□□ -0.55
SNX1-213ENST00000561026 UBE2MP61081 183 aaKnown RBP11.59□□□□□ -0.55
SNX1-213ENST00000561026 TMEM182Q6ZP80 229 aaPredicted RBP11.59□□□□□ -0.55
SNX1-213ENST00000561026 BPIFCQ8NFQ6 507 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 OR4D5Q8NGN0 318 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 C20orf173Q96LM9 149 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 RSG1Q9BU20 258 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 SLC25A22Q9H936 323 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 RPRMQ9NS64 109 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 STRAPQ9Y3F4 350 aaKnown RBP11.59□□□□□ -0.55
SNX1-213ENST00000561026 DNAH6Q9C0G6 4158 aa11.59□□□□□ -0.55
SNX1-213ENST00000561026 H3BP45 60 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 P0DMU3 169 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 FAM231AP0DMU4 169 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 FAM231CP0DMU5 169 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 ID3Q02535 119 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 AKR1C1Q04828 323 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 C1orf158Q8N1D5 194 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 POM121L12Q8N7R1 296 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 DKK2Q9UBU2 259 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 GOLT1BQ9Y3E0 138 aa11.58□□□□□ -0.56
SNX1-213ENST00000561026 C9orf170A2RU37 121 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 ADAP1O75689 374 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 S100A7P31151 101 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 SPANXN2Q5MJ10 180 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 ACOT7LQ6ZUV0 252 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 TMEM144Q7Z5S9 345 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 OR1B1Q8NGR6 318 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 GPR82Q96P67 336 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 TMEM147Q9BVK8 224 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 SRRQ9GZT4 340 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 DOK5Q9P104 306 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 HERC2O95714 4834 aa11.57□□□□□ -0.56
SNX1-213ENST00000561026 TEX48A0A1B0GUV7 120 aa11.56□□□□□ -0.56
SNX1-213ENST00000561026 A8MTW9 85 aa11.56□□□□□ -0.56
SNX1-213ENST00000561026 NDUFB6O95139 128 aa11.56□□□□□ -0.56
SNX1-213ENST00000561026 POLR2GP62487 172 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNX1-213ENST00000561026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.56□□□□□ -0.56
SNX1-213ENST00000561026 C7orf50Q9BRJ6 194 aaKnown RBP11.56□□□□□ -0.56
SNX1-213ENST00000561026 NIPSNAP3BQ9BS92 247 aa11.56□□□□□ -0.56
SNX1-213ENST00000561026 RBM38Q9H0Z9 239 aaKnown RBP11.56□□□□□ -0.56
SNX1-213ENST00000561026 HBE1P02100 147 aa11.55□□□□□ -0.56
SNX1-213ENST00000561026 AMTNQ6UX39 209 aa11.55□□□□□ -0.56
SNX1-213ENST00000561026 LINC00336Q6ZUF6 198 aa11.55□□□□□ -0.56
SNX1-213ENST00000561026 FAM210BQ96KR6 192 aa11.55□□□□□ -0.56
SNX1-213ENST00000561026 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
SNX1-213ENST00000561026 LOC102723971A0A1B0GUV8 181 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms