RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SVILO95425 2214 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 FHL1Q13642 323 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 IMMP1LQ96LU5 166 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 CTSBP07858 339 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 NUP37Q8NFH4 326 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 TMEM167AQ8TBQ9 72 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 ALPK3Q96L96 1907 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 DYNLRB2Q8TF09 96 aa10.55□□□□□ -0.72
PTCH1-212ENST00000546744 CNOT1A5YKK6 2376 aaKnown RBP10.55□□□□□ -0.72
PTCH1-212ENST00000546744 CELA2AP08217 269 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 GTSCR1Q86UQ5 136 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 KLHDC3Q9BQ90 382 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 EP300Q09472 2414 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-212ENST00000546744 TRBV7-9A0A0J9YWB2 115 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 GGTLC3B5MD39 225 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 INAFM2P0DMQ5 153 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 PPP1R27Q86WC6 154 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 WFDC3Q8IUB2 231 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 RPUSD1Q9UJJ7 312 aaKnown RBP10.54□□□□□ -0.72
PTCH1-212ENST00000546744 NUP210Q8TEM1 1887 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-212ENST00000546744 SMIM27A0A1W2PRY6 76 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 NTF4P34130 210 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 C1orf147Q96MC9 270 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-212ENST00000546744 VGLL1Q99990 258 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 SRSF8Q9BRL6 282 aaKnown RBP10.54□□□□□ -0.72
PTCH1-212ENST00000546744 RFNGQ9Y644 331 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 IGKV1-27A0A075B6S5 117 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 SNRNP200O75643 2136 aaKnown RBP10.54□□□□□ -0.72
PTCH1-212ENST00000546744 V9GYV3 84 aa10.54□□□□□ -0.72
PTCH1-212ENST00000546744 CECR9P0C854 216 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 RPL15P61313 204 aaKnown RBP10.53□□□□□ -0.72
PTCH1-212ENST00000546744 C2orf16Q68DN1 1984 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 PAX9P55771 341 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE5Q13069 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE6Q13070 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 FAM74A4Q5TZK3 123 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 PMS2CLQ68D20 193 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 SLC25A45Q8N413 288 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 MBNL3Q9NUK0 354 aaKnown RBP10.53□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 B9A039 149 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE7O76087 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 TNFRSF6BO95407 300 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 IGHV3-48P01763 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 IGHV4-39P01824 125 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 GAGE4Q13068 117 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 FAM57AQ8TBR7 257 aa10.53□□□□□ -0.72
PTCH1-212ENST00000546744 OVOL1O14753 267 aa10.52□□□□□ -0.72
PTCH1-212ENST00000546744 VDAC2P45880 294 aaPredicted RBP10.52□□□□□ -0.72
PTCH1-212ENST00000546744 FOXL2P58012 376 aa10.52□□□□□ -0.72
PTCH1-212ENST00000546744 KLF5Q13887 457 aaPredicted RBP10.52□□□□□ -0.72
PTCH1-212ENST00000546744 CSRP2Q16527 193 aa10.52□□□□□ -0.72
PTCH1-212ENST00000546744 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.72
PTCH1-212ENST00000546744 IGKV3-7A0A075B6H7 116 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 SRRM5B3KS81 715 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 PRTN3P24158 256 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 ETDBQ3ZM63 59 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 OR11H6Q8NGC7 330 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 NAA38Q9BRA0 125 aaKnown RBP10.52□□□□□ -0.73
PTCH1-212ENST00000546744 PRDM6Q9NQX0 595 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 C9orf153Q5TBE3 101 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 PPP1R32Q7Z5V6 425 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 ZNF837Q96EG3 531 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-212ENST00000546744 MPDZO75970 2070 aa10.52□□□□□ -0.73
PTCH1-212ENST00000546744 A0A1W2PRD5 423 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 A0A1W2PRF3 423 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 A0A1W2PRM7 423 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 AZU1P20160 251 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 LYZL1Q6UWQ5 148 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 FBXL15Q9H469 300 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 LRRK1Q38SD2 2015 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 SHISA9B4DS77 424 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 CGB1A6NKQ9 187 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 WNT2P09544 360 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 PF4V1P10720 104 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 IFITM1P13164 125 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 Q6ZRM9 215 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 DOCK11Q5JSL3 2073 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 HTN1P15515 57 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 Q86TA4 180 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 ZIC4Q8N9L1 334 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 ABCA7Q8IZY2 2146 aa10.51□□□□□ -0.73
PTCH1-212ENST00000546744 A0A0G2JRQ6 117 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 HAX1O00165 279 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 SPEM2Q0P670 501 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 PMVKQ15126 192 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 TMEM155Q4W5P6 130 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 NBR2O15453 112 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 ZNF329Q86UD4 541 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 SAP25Q8TEE9 199 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 ETV2O00321 342 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-212ENST00000546744 VCYO14598 125 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 TGFAP01135 160 aa10.5□□□□□ -0.73
PTCH1-212ENST00000546744 UTF1Q5T230 341 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms