RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 GPR82Q96P67 336 aa8.89□□□□□ -0.99
SNHG1-221ENST00000544983 GGTLC1Q9BX51 225 aa8.89□□□□□ -0.99
SNHG1-221ENST00000544983 NPCDR1Q9BY65 106 aa8.89□□□□□ -0.99
SNHG1-221ENST00000544983 MLXQ9UH92 298 aa8.89□□□□□ -0.99
SNHG1-221ENST00000544983 TSPAN4O14817 238 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 ARPC5O15511 151 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 BUB3O43684 328 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 JTBO76095 146 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 C1QBP02746 253 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 ORM2P19652 201 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 PAFAH1B2P68402 229 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 PRR20EP86478 221 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 PRR20CP86479 221 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 PRR20DP86480 221 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 PRR20BP86481 221 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 PRR20AP86496 221 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 OPCMLQ14982 345 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 BEAN1Q3B7T3 259 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 CD300EQ496F6 205 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-221ENST00000544983 STPG3Q8N7X2 389 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 OR1B1Q8NGR6 318 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 PPP1R14BQ96C90 147 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 HYLS1Q96M11 299 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 PFDN5Q99471 154 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 ARL6Q9H0F7 186 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 SLC39A9Q9NUM3 307 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 HIGD1AQ9Y241 93 aa8.88□□□□□ -0.99
SNHG1-221ENST00000544983 ZNF256Q9Y2P7 627 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-221ENST00000544983 TRAV2A0A0B4J234 112 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 GATA2P23769 480 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-221ENST00000544983 B2MP61769 119 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 C16orf54Q6UWD8 224 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 TMEM182Q6ZP80 229 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-221ENST00000544983 KCNRGQ8N5I3 272 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 GATAD1Q8WUU5 269 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 ST8SIA2Q92186 375 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 SPAG8Q99932 426 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-221ENST00000544983 SMIM3Q9BZL3 60 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 DNAJC4Q9NNZ3 241 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 TIMM9Q9Y5J7 89 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 PXMP4Q9Y6I8 212 aa8.87□□□□□ -0.99
SNHG1-221ENST00000544983 MEGF8Q7Z7M0 2845 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 A0A1B0GVG6 124 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 OR4C46A6NHA9 309 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 SMLR1H3BR10 107 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 COX7A2P2O60397 106 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 OR5G3P0C626 314 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 CMC4P56277 68 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-221ENST00000544983 SAMD13Q5VXD3 122 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 C10orf113Q5VZT2 155 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 MIC13Q5XKP0 118 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 FAM90A2PQ658T7 463 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 TCF24Q7RTU0 167 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 TMEM61Q8N0U2 210 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 OR11H4Q8NGC9 324 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 GNPNAT1Q96EK6 184 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-221ENST00000544983 RNF2Q99496 336 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 SHANK2-AS3Q9BTD1 123 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 SLC25A39Q9BZJ4 359 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-221ENST00000544983 ARV1Q9H2C2 271 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 WFDC1Q9HC57 220 aa8.86□□□□□ -0.99
SNHG1-221ENST00000544983 IGHV3-49A0A0A0MS15 119 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 ZNF98A6NK75 572 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 APOHP02749 345 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-221ENST00000544983 GP9P14770 177 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 C4BPBP20851 252 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 MEOX2P50222 304 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 EIF5AP63241 154 aaKnown RBP8.85□□□□□ -0.99
SNHG1-221ENST00000544983 SERF2P84101 59 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 GTSCR1Q86UQ5 136 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 OR8I2Q8N0Y5 310 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 ARPC5LQ9BPX5 153 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 FAM110AQ9BQ89 295 aa8.85□□□□□ -0.99
SNHG1-221ENST00000544983 PSMG3Q9BT73 122 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-221ENST00000544983 SEPSECSQ9HD40 501 aaKnown RBP8.85□□□□□ -0.99
SNHG1-221ENST00000544983 IGHV3OR16-13A0A075B7E8 117 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 IGHV3-74A0A0B4J1X5 117 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 KANTRA0A1W2PQU2 76 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 ZNF785A8K8V0 405 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 H3BRN7 92 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 MBP02144 154 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 RPL7P18124 248 aaKnown RBP8.84□□□□□ -0.99
SNHG1-221ENST00000544983 EDN2P20800 178 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 GALR1P47211 349 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 KRTAP10-11P60412 298 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 RPL11P62913 178 aaKnown RBP8.84□□□□□ -0.99
SNHG1-221ENST00000544983 GUCA2BQ16661 112 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 ZFP69Q49AA0 526 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 SIGLEC15Q6ZMC9 328 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 OR2G3Q8NGZ4 309 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 RSG1Q9BU20 258 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 DOK5Q9P104 306 aa8.84□□□□□ -0.99
SNHG1-221ENST00000544983 IZUMO1RA6ND01 250 aa8.83□□□□□ -1
SNHG1-221ENST00000544983 DNASE2O00115 360 aaPredicted RBP8.83□□□□□ -1
SNHG1-221ENST00000544983 ACOT6Q3I5F7 207 aaPredicted RBP8.83□□□□□ -1
SNHG1-221ENST00000544983 FFAR4Q5NUL3 377 aa8.83□□□□□ -1
SNHG1-221ENST00000544983 RPL7L1Q6DKI1 246 aaKnown RBP8.83□□□□□ -1
SNHG1-221ENST00000544983 PATE2Q6UY27 113 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms