RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 CST7O76096 145 aa11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 PVALBP20472 110 aaPredicted RBP11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 NUP62P37198 522 aaPredicted RBP11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 BCAP31P51572 246 aa11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 DEFB131AP59861 70 aa11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 TEPPQ6URK8 271 aa11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 TMEM252Q8N6L7 170 aa11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 MGAT4CQ9UBM8 478 aa11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 SSNA1O43805 119 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 SULT1A1P50225 295 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 PLP1P60201 277 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 SELENOTP62341 195 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 CYCSP99999 105 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 SLC38A11Q08AI6 406 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 NRN1Q9NPD7 142 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 OR5AC2Q9NZP5 309 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 PFDN2Q9UHV9 154 aa11.89□□□□□ -0.51
TSPAN4-218ENST00000529566 KIR2DL5BA0A0G2JN68 375 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 KIR2DL5BA0A0G2JPC4 375 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 RPL35AP18077 110 aaKnown RBP11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 ORM2P19652 201 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 KIR2DL5AQ8N109 375 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 TMEM217Q8N7C4 229 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 KIR2DL5BQ8NHK3 375 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 C17orf77Q96MU5 243 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 MGST2Q99735 147 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 RNF126Q9BV68 326 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
TSPAN4-218ENST00000529566 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
TSPAN4-218ENST00000529566 ZNF688P0C7X2 276 aa11.87□□□□□ -0.51
TSPAN4-218ENST00000529566 PATE2Q6UY27 113 aa11.87□□□□□ -0.51
TSPAN4-218ENST00000529566 OR1B1Q8NGR6 318 aa11.87□□□□□ -0.51
TSPAN4-218ENST00000529566 OVOL2Q9BRP0 275 aa11.87□□□□□ -0.51
TSPAN4-218ENST00000529566 EDA2RQ9HAV5 297 aa11.87□□□□□ -0.51
TSPAN4-218ENST00000529566 SEPSECSQ9HD40 501 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-218ENST00000529566 FBXL17Q9UF56 701 aa11.87□□□□□ -0.51
TSPAN4-218ENST00000529566 E5RGE8 158 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 UBE2CO00762 179 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 SOCS3O14543 225 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 AGPAT2O15120 278 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 HYPMO75409 117 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 LINC00869P0C866 280 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 S100A11P31949 105 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 APOC4P55056 127 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 LRRC37A5PQ49AS3 106 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 Q6ZWC4 215 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 OR8I2Q8N0Y5 310 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 PPP1R14BQ96C90 147 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 SHANK2-AS3Q9BTD1 123 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 TMEM147Q9BVK8 224 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 SLC25A32Q9H2D1 315 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 UQCC1Q9NVA1 299 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 DOK5Q9P104 306 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 WDR83OSQ9Y284 106 aa11.86□□□□□ -0.51
TSPAN4-218ENST00000529566 AGRNO00468 2067 aa11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 H3BRN7 92 aa11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 RLN2P04090 185 aa11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 CXCL3P19876 107 aa11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 NHLH2Q02577 135 aa11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 STX12Q86Y82 276 aa11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 SCRT1Q9BWW7 348 aa11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 SLC25A39Q9BZJ4 359 aaPredicted RBP11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
TSPAN4-218ENST00000529566 KNCNA6PVL3 124 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 MPC2O95563 127 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 HBG1P69891 147 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 HBG2P69892 147 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 EWSR1Q01844 656 aaKnown RBP eCLIP11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 ATP6V1FQ16864 119 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 PSMG4Q5JS54 123 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 ZNF546Q86UE3 836 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 CHAC2Q8WUX2 184 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 UHRF2Q96PU4 802 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 ARL6Q9H0F7 186 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 CSTL1Q9H114 145 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 TP53TG1Q9Y2A0 90 aa11.84□□□□□ -0.51
TSPAN4-218ENST00000529566 GIG44P09565 113 aaPredicted RBP11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 CAMLGP49069 296 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 SNRPD3P62318 126 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 PRR20EP86478 221 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 PRR20CP86479 221 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 PRR20DP86480 221 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 PRR20BP86481 221 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 PRR20AP86496 221 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 PXDC1Q5TGL8 231 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 TRPT1Q86TN4 253 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 RNF183Q96D59 192 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 RSG1Q9BU20 258 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
TSPAN4-218ENST00000529566 SPRY2O43597 315 aa11.82□□□□□ -0.52
TSPAN4-218ENST00000529566 OR5G3P0C626 314 aa11.82□□□□□ -0.52
TSPAN4-218ENST00000529566 RAP2BP61225 183 aa11.82□□□□□ -0.52
TSPAN4-218ENST00000529566 DEFB135Q30KP9 77 aa11.82□□□□□ -0.52
TSPAN4-218ENST00000529566 MIC13Q5XKP0 118 aa11.82□□□□□ -0.52
TSPAN4-218ENST00000529566 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.82□□□□□ -0.52
TSPAN4-218ENST00000529566 OR11H7Q8NGC8 314 aa11.82□□□□□ -0.52
TSPAN4-218ENST00000529566 TMEM37Q8WXS4 190 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms