RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SYNGR2O43760 224 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 MBPP02686 304 aaPredicted RBP4.8□□□□□ -1.64
KDM3B-208ENST00000512928 GPX4P36969 197 aaPredicted RBP4.8□□□□□ -1.64
KDM3B-208ENST00000512928 AP2S1P53680 142 aaPredicted RBP4.8□□□□□ -1.64
KDM3B-208ENST00000512928 AKR1C1Q04828 323 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 GAMTQ14353 236 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 IAH1Q2TAA2 248 aaPredicted RBP4.8□□□□□ -1.64
KDM3B-208ENST00000512928 PSMG4Q5JS54 123 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 ACTL10Q5JWF8 245 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 OR8G2PQ6IF36 304 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 TMEM14EPQ6UXP3 125 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 SIGLEC15Q6ZMC9 328 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 CHAC2Q8WUX2 184 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 ASB13Q8WXK3 278 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 RNF125Q96EQ8 232 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 SMIM8Q96KF7 97 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 C2orf50Q96LR7 162 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 GPN1Q9HCN4 374 aaPredicted RBP4.8□□□□□ -1.64
KDM3B-208ENST00000512928 GSKIPQ9P0R6 139 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 MGAT4CQ9UBM8 478 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 PFDN2Q9UHV9 154 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 TP53TG1Q9Y2A0 90 aa4.8□□□□□ -1.64
KDM3B-208ENST00000512928 STRAPQ9Y3F4 350 aaKnown RBP4.8□□□□□ -1.64
KDM3B-208ENST00000512928 SACSQ9NZJ4 4579 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 TRAV2A0A0B4J234 112 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 H0YIZ8 118 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 K7EPK0 472 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 K7EQG2 157 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 CCSO14618 274 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 TSC22D2O75157 780 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 JTBO76095 146 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 CXCL3P19876 107 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 NUP62P37198 522 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-208ENST00000512928 NKX2-1P43699 371 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-208ENST00000512928 SNRPD3P62318 126 aaKnown RBP4.79□□□□□ -1.64
KDM3B-208ENST00000512928 POLR2GP62487 172 aaKnown RBP eCLIP4.79□□□□□ -1.64
KDM3B-208ENST00000512928 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-208ENST00000512928 C16orf54Q6UWD8 224 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 ACOT7LQ6ZUV0 252 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 TMEM217Q8N7C4 229 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 OR11H7Q8NGC8 314 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 GLMPQ8WWB7 406 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 RNF183Q96D59 192 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 LINC00052Q96N35 136 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 RARRES2Q99969 163 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 SLC25A22Q9H936 323 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 NRN1Q9NPD7 142 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 PSENENQ9NZ42 101 aa4.79□□□□□ -1.64
KDM3B-208ENST00000512928 IGKV1D-37A0A075B6S9 117 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 LCE6AA0A183 80 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 A6NJY4 79 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 FNDC10F2Z333 226 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 DEFB4AO15263 64 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 BUB3O43684 328 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 DEDDO75618 318 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 ORM2P19652 201 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 RRAS2P62070 204 aaPredicted RBP4.78□□□□□ -1.64
KDM3B-208ENST00000512928 EWSR1Q01844 656 aaKnown RBP eCLIP4.78□□□□□ -1.64
KDM3B-208ENST00000512928 VWC2Q2TAL6 325 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 LINC01559Q495D7 138 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 GSG1LQ6UXU4 331 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 OR8I2Q8N0Y5 310 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 BPIFCQ8NFQ6 507 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 OR1B1Q8NGR6 318 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 OR11H2Q8NH07 326 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 DCANP1Q8TF63 244 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 RAB40CQ96S21 281 aa4.78□□□□□ -1.64
KDM3B-208ENST00000512928 C5orf51A6NDU8 294 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 L7N2F9 121 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 SIX6O95475 246 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 IGKV3-20P01619 116 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 GIPP09681 153 aaPredicted RBP4.77□□□□□ -1.65
KDM3B-208ENST00000512928 METTL15P1P0C7V9 234 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 GATA2P23769 480 aaPredicted RBP4.77□□□□□ -1.65
KDM3B-208ENST00000512928 ID1P41134 155 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 BCAP31P51572 246 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 VAMP2P63027 116 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 CYCSP99999 105 aaKnown RBP4.77□□□□□ -1.65
KDM3B-208ENST00000512928 RAB32Q13637 225 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 FCN2Q15485 313 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 TRPT1Q86TN4 253 aaKnown RBP4.77□□□□□ -1.65
KDM3B-208ENST00000512928 THAP8Q8NA92 274 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 TRGV9Q99603 122 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 RNF126Q9BV68 326 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 TMEM147Q9BVK8 224 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 LYRM2Q9NU23 88 aaPredicted RBP4.77□□□□□ -1.65
KDM3B-208ENST00000512928 CLEC5AQ9NY25 188 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 DOK5Q9P104 306 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 FBXL17Q9UF56 701 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 LSM5Q9Y4Y9 91 aaKnown RBP4.77□□□□□ -1.65
KDM3B-208ENST00000512928 U3KQE9 123 aa4.77□□□□□ -1.65
KDM3B-208ENST00000512928 LYSTQ99698 3801 aa4.76□□□□□ -1.65
KDM3B-208ENST00000512928 IGKV1OR2-108A0A075B7D4 117 aa4.76□□□□□ -1.65
KDM3B-208ENST00000512928 NUPR2A6NF83 97 aa4.76□□□□□ -1.65
KDM3B-208ENST00000512928 GOSR2O14653 212 aa4.76□□□□□ -1.65
KDM3B-208ENST00000512928 CCNKO75909 580 aa4.76□□□□□ -1.65
KDM3B-208ENST00000512928 MPC2O95563 127 aa4.76□□□□□ -1.65
KDM3B-208ENST00000512928 CFDP00746 253 aaPredicted RBP4.76□□□□□ -1.65
KDM3B-208ENST00000512928 OR5G3P0C626 314 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms