RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 GPR82Q96P67 336 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 NEURL2Q9BR09 285 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 HIGD1AQ9Y241 93 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 IGHV3OR16-8A0A075B7F1 116 aa15.04■□□□□ -0
SHROOM3-209ENST00000490690 ZNF207O43670 478 aaKnown RBP15.04■□□□□ -0
SHROOM3-209ENST00000490690 ORM2P19652 201 aa15.04■□□□□ -0
SHROOM3-209ENST00000490690 C4BPBP20851 252 aa15.04■□□□□ -0
SHROOM3-209ENST00000490690 EIF5AP63241 154 aaKnown RBP15.04■□□□□ -0
SHROOM3-209ENST00000490690 SLC39A9Q9NUM3 307 aa15.04■□□□□ -0
SHROOM3-209ENST00000490690 TIMM9Q9Y5J7 89 aa15.04■□□□□ -0
SHROOM3-209ENST00000490690 VWFP04275 2813 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 SMLR1H3BR10 107 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 COX7A2P2O60397 106 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 OR5G3P0C626 314 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 PRR20EP86478 221 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 PRR20CP86479 221 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 PRR20DP86480 221 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 PRR20BP86481 221 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 PRR20AP86496 221 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 KPRPQ5T749 579 aaPredicted RBP15.03■□□□□ -0
SHROOM3-209ENST00000490690 KCNRGQ8N5I3 272 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 GNPNAT1Q96EK6 184 aaPredicted RBP15.03■□□□□ -0
SHROOM3-209ENST00000490690 RNF2Q99496 336 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 SPAG8Q99932 426 aaPredicted RBP15.03■□□□□ -0
SHROOM3-209ENST00000490690 ARL6Q9H0F7 186 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 PXMP4Q9Y6I8 212 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 U3KQE9 123 aa15.03■□□□□ -0
SHROOM3-209ENST00000490690 KANTRA0A1W2PQU2 76 aa15.02■□□□□ -0
SHROOM3-209ENST00000490690 G3V4G9 280 aa15.02■□□□□ -0
SHROOM3-209ENST00000490690 BUB3O43684 328 aa15.02■□□□□ -0
SHROOM3-209ENST00000490690 CD300EQ496F6 205 aaPredicted RBP15.02■□□□□ -0
SHROOM3-209ENST00000490690 SAMD13Q5VXD3 122 aa15.02■□□□□ -0
SHROOM3-209ENST00000490690 GATAD1Q8WUU5 269 aa15.02■□□□□ -0
SHROOM3-209ENST00000490690 ARPC5LQ9BPX5 153 aa15.02■□□□□ -0
SHROOM3-209ENST00000490690 ARV1Q9H2C2 271 aa15.02■□□□□ -0
SHROOM3-209ENST00000490690 MLXQ9UH92 298 aa15.02■□□□□ -0
SHROOM3-209ENST00000490690 ZNF256Q9Y2P7 627 aaPredicted RBP15.02■□□□□ -0
SHROOM3-209ENST00000490690 A0A1B0GVG6 124 aa15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 TSPAN4O14817 238 aa15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 GATA2P23769 480 aaPredicted RBP15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 ZFP69Q49AA0 526 aa15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 C10orf113Q5VZT2 155 aa15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 ADAMTSL5Q6ZMM2 481 aa15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 ST8SIA2Q92186 375 aa15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 PSMG3Q9BT73 122 aaPredicted RBP15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 DNAJC4Q9NNZ3 241 aa15.01□□□□□ -0.01
SHROOM3-209ENST00000490690 TRAV2A0A0B4J234 112 aa15□□□□□ -0.01
SHROOM3-209ENST00000490690 OR4C46A6NHA9 309 aa15□□□□□ -0.01
SHROOM3-209ENST00000490690 PFDN1O60925 122 aa15□□□□□ -0.01
SHROOM3-209ENST00000490690 CMC4P56277 68 aaPredicted RBP15□□□□□ -0.01
SHROOM3-209ENST00000490690 BEAN1Q3B7T3 259 aa15□□□□□ -0.01
SHROOM3-209ENST00000490690 MIC13Q5XKP0 118 aa15□□□□□ -0.01
SHROOM3-209ENST00000490690 C16orf54Q6UWD8 224 aa15□□□□□ -0.01
SHROOM3-209ENST00000490690 GTSCR1Q86UQ5 136 aa15□□□□□ -0.01
SHROOM3-209ENST00000490690 MBP02144 154 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 RPL7P18124 248 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 GALR1P47211 349 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 MEOX2P50222 304 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 SERF2P84101 59 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 TMEM182Q6ZP80 229 aaPredicted RBP14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 TCF24Q7RTU0 167 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 OR8I2Q8N0Y5 310 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 OR11H4Q8NGC9 324 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 SHANK2-AS3Q9BTD1 123 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 SLC25A39Q9BZJ4 359 aaPredicted RBP14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 WFDC1Q9HC57 220 aa14.99□□□□□ -0.01
SHROOM3-209ENST00000490690 ZNF98A6NK75 572 aa14.98□□□□□ -0.01
SHROOM3-209ENST00000490690 H3BRN7 92 aa14.98□□□□□ -0.01
SHROOM3-209ENST00000490690 RPL11P62913 178 aaKnown RBP14.98□□□□□ -0.01
SHROOM3-209ENST00000490690 SIGLEC15Q6ZMC9 328 aa14.98□□□□□ -0.01
SHROOM3-209ENST00000490690 TMEM61Q8N0U2 210 aa14.98□□□□□ -0.01
SHROOM3-209ENST00000490690 DOK5Q9P104 306 aa14.98□□□□□ -0.01
SHROOM3-209ENST00000490690 IGHV3OR16-13A0A075B7E8 117 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 IGHV3-49A0A0A0MS15 119 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 IGHV3-74A0A0B4J1X5 117 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 DNASE2O00115 360 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 BCL2L11O43521 198 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 GP9P14770 177 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 GUCA2BQ16661 112 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 ACOT6Q3I5F7 207 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 LINC00305Q7Z4B0 112 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 OR2G3Q8NGZ4 309 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 GLMPQ8WWB7 406 aa14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 MRPL32Q9BYC8 188 aaKnown RBP14.97□□□□□ -0.01
SHROOM3-209ENST00000490690 APOHP02749 345 aaPredicted RBP14.96□□□□□ -0.01
SHROOM3-209ENST00000490690 FFAR4Q5NUL3 377 aa14.96□□□□□ -0.01
SHROOM3-209ENST00000490690 FAM90A2PQ658T7 463 aa14.96□□□□□ -0.01
SHROOM3-209ENST00000490690 HSD17B11Q8NBQ5 300 aa14.96□□□□□ -0.01
SHROOM3-209ENST00000490690 RSG1Q9BU20 258 aa14.96□□□□□ -0.01
SHROOM3-209ENST00000490690 IGHV3-66A0A0C4DH42 116 aa14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 EDN2P20800 178 aa14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 RPL7L1Q6DKI1 246 aaKnown RBP14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 TMUB2Q71RG4 321 aa14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 BPIFA4PQ86YQ2 179 aa14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 STXBP6Q8NFX7 210 aa14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 FAM110AQ9BQ89 295 aa14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 SLC25A22Q9H936 323 aa14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 SEPSECSQ9HD40 501 aaKnown RBP14.95□□□□□ -0.02
SHROOM3-209ENST00000490690 M6PRP20645 277 aa14.94□□□□□ -0.02
SHROOM3-209ENST00000490690 ATP6V0CP27449 155 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms