RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 GGTLC1Q9BX51 225 aa13.09□□□□□ -0.31
ERCC3-207ENST00000490062 IGHV3-49A0A0A0MS15 119 aa13.08□□□□□ -0.32
ERCC3-207ENST00000490062 UBE2L5PA0A1B0GUS4 154 aa13.08□□□□□ -0.32
ERCC3-207ENST00000490062 LINC00869P0C866 280 aa13.08□□□□□ -0.32
ERCC3-207ENST00000490062 GATA2P23769 480 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-207ENST00000490062 CAMLGP49069 296 aa13.08□□□□□ -0.32
ERCC3-207ENST00000490062 TNFSF18Q9UNG2 199 aa13.08□□□□□ -0.32
ERCC3-207ENST00000490062 HELTA6NFD8 242 aa13.07□□□□□ -0.32
ERCC3-207ENST00000490062 A8MZ25 164 aa13.07□□□□□ -0.32
ERCC3-207ENST00000490062 PRB2P02812 416 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-207ENST00000490062 AP2S1P53680 142 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-207ENST00000490062 TCF24Q7RTU0 167 aa13.07□□□□□ -0.32
ERCC3-207ENST00000490062 S100A7AQ86SG5 101 aa13.07□□□□□ -0.32
ERCC3-207ENST00000490062 PBDC1Q9BVG4 233 aa13.07□□□□□ -0.32
ERCC3-207ENST00000490062 WDR61Q9GZS3 305 aaKnown RBP13.07□□□□□ -0.32
ERCC3-207ENST00000490062 IGHV3OR16-13A0A075B7E8 117 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 IGHV3-74A0A0B4J1X5 117 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 RNF222A6NCQ9 220 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 HYPMO75409 117 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 CLINT1Q14677 625 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 GTSCR1Q86UQ5 136 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 NPCDR1Q9BY65 106 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 C19orf73Q9NVV2 129 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 FBXL17Q9UF56 701 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 RNF24Q9Y225 148 aa13.06□□□□□ -0.32
ERCC3-207ENST00000490062 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-207ENST00000490062 OR4C46A6NHA9 309 aa13.05□□□□□ -0.32
ERCC3-207ENST00000490062 H3BRN7 92 aa13.05□□□□□ -0.32
ERCC3-207ENST00000490062 FGF7P21781 194 aa13.05□□□□□ -0.32
ERCC3-207ENST00000490062 GUCA2BQ16661 112 aa13.05□□□□□ -0.32
ERCC3-207ENST00000490062 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
ERCC3-207ENST00000490062 SEPSECSQ9HD40 501 aaKnown RBP13.05□□□□□ -0.32
ERCC3-207ENST00000490062 KCNIP2Q9NS61 270 aa13.05□□□□□ -0.32
ERCC3-207ENST00000490062 IGHV3-66A0A0C4DH42 116 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 ZNF98A6NK75 572 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 ORM2P19652 201 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 PAFAH1B2P68402 229 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 PATE2Q6UY27 113 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 INO80EQ8NBZ0 244 aaPredicted RBP13.04□□□□□ -0.32
ERCC3-207ENST00000490062 OR1B1Q8NGR6 318 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 GPR82Q96P67 336 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 SLC25A39Q9BZJ4 359 aaPredicted RBP13.04□□□□□ -0.32
ERCC3-207ENST00000490062 HIGD1AQ9Y241 93 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 SMAD5-AS1Q9Y6J3 95 aa13.04□□□□□ -0.32
ERCC3-207ENST00000490062 PRKDCP78527 4128 aaKnown RBP13.03□□□□□ -0.32
ERCC3-207ENST00000490062 FXYD6-FXYD2A0A087WZ82 144 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 HMSDA8MTL9 139 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 CD7P09564 240 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
ERCC3-207ENST00000490062 B2MP61769 119 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 ZNF266Q14584 549 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 MIC13Q5XKP0 118 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 Q6ZRG5 221 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 TMEM37Q8WXS4 190 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 ST6GAL2Q96JF0 529 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 ARL6Q9H0F7 186 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 ARV1Q9H2C2 271 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 MS4A6AQ9H2W1 248 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 WFDC1Q9HC57 220 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 SLC39A9Q9NUM3 307 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
ERCC3-207ENST00000490062 K7EQG2 157 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 IFNA5P01569 189 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 CD81P60033 236 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 TCTE3Q8IZS6 198 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 OR1L4Q8NGR5 311 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 DCANP1Q8TF63 244 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 GATAD1Q8WUU5 269 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 PFDN5Q99471 154 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 SELENOKQ9Y6D0 94 aa13.02□□□□□ -0.33
ERCC3-207ENST00000490062 C17orf112F2Z3M2 114 aa13.01□□□□□ -0.33
ERCC3-207ENST00000490062 ZNF345Q14585 488 aa13.01□□□□□ -0.33
ERCC3-207ENST00000490062 PPP1R14BQ96C90 147 aa13.01□□□□□ -0.33
ERCC3-207ENST00000490062 DNAJC4Q9NNZ3 241 aa13.01□□□□□ -0.33
ERCC3-207ENST00000490062 NRN1Q9NPD7 142 aa13.01□□□□□ -0.33
ERCC3-207ENST00000490062 OR5G3P0C626 314 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 ODF3L2Q3SX64 289 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 SAMD13Q5VXD3 122 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 OR8I2Q8N0Y5 310 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 ZNF709Q8N972 641 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 SMIM3Q9BZL3 60 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 SLC25A32Q9H2D1 315 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 DOK5Q9P104 306 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 TIMM9Q9Y5J7 89 aa13□□□□□ -0.33
ERCC3-207ENST00000490062 TAAR5O14804 337 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 COX7A2P2O60397 106 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 IGHV4-30-4P0DP06 118 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 RPL7P18124 248 aaKnown RBP12.99□□□□□ -0.33
ERCC3-207ENST00000490062 C10orf113Q5VZT2 155 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 LINC00322Q6ZN03 302 aaPredicted RBP12.99□□□□□ -0.33
ERCC3-207ENST00000490062 LINC00305Q7Z4B0 112 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 OR11H4Q8NGC9 324 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 SCGB1C1Q8TD33 95 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 UHRF2Q96PU4 802 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 SCRT1Q9BWW7 348 aa12.99□□□□□ -0.33
ERCC3-207ENST00000490062 OR11H12B2RN74 326 aa12.98□□□□□ -0.33
ERCC3-207ENST00000490062 DNASE2O00115 360 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-207ENST00000490062 SOCS3O14543 225 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms