RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 PRR20CP86479 221 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 PRR20DP86480 221 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 PRR20BP86481 221 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 PRR20AP86496 221 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 LGALSLQ3ZCW2 172 aaPredicted RBP10.69□□□□□ -0.7
NUP188-207ENST00000487952 GNPNAT1Q96EK6 184 aaPredicted RBP10.69□□□□□ -0.7
NUP188-207ENST00000487952 PFDN5Q99471 154 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 SMPXQ9UHP9 88 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 HIGD1AQ9Y241 93 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 TIMM9Q9Y5J7 89 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 ANK2Q01484 3957 aa10.69□□□□□ -0.7
NUP188-207ENST00000487952 IGHV3OR16-13A0A075B7E8 117 aa10.68□□□□□ -0.7
NUP188-207ENST00000487952 IGHV3-74A0A0B4J1X5 117 aa10.68□□□□□ -0.7
NUP188-207ENST00000487952 IGLL1P15814 213 aa10.68□□□□□ -0.7
NUP188-207ENST00000487952 CRYBB3P26998 211 aa10.68□□□□□ -0.7
NUP188-207ENST00000487952 FFAR4Q5NUL3 377 aa10.68□□□□□ -0.7
NUP188-207ENST00000487952 RHPN1-AS1Q9BWJ2 59 aa10.68□□□□□ -0.7
NUP188-207ENST00000487952 SIGLEC8Q9NYZ4 499 aa10.68□□□□□ -0.7
NUP188-207ENST00000487952 ELOA3CA0A087WX78 387 aaPredicted RBP10.67□□□□□ -0.7
NUP188-207ENST00000487952 IGHV3-66A0A0C4DH42 116 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 C8orf88P0DMB2 117 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 EDN2P20800 178 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 ATP6V0CP27449 155 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 NKX2-5P52952 324 aaPredicted RBP10.67□□□□□ -0.7
NUP188-207ENST00000487952 C10orf113Q5VZT2 155 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 IL34Q6ZMJ4 242 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 C9orf62Q8N4C0 152 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 PSMG3Q9BT73 122 aaPredicted RBP10.67□□□□□ -0.7
NUP188-207ENST00000487952 ARV1Q9H2C2 271 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 CYTL1Q9NRR1 136 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 TECRQ9NZ01 308 aaKnown RBP10.67□□□□□ -0.7
NUP188-207ENST00000487952 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
NUP188-207ENST00000487952 NOTCH3Q9UM47 2321 aa10.66□□□□□ -0.7
NUP188-207ENST00000487952 CHEK1O14757 476 aa10.66□□□□□ -0.7
NUP188-207ENST00000487952 APOHP02749 345 aaPredicted RBP10.66□□□□□ -0.7
NUP188-207ENST00000487952 TPT1P13693 172 aaKnown RBP10.66□□□□□ -0.7
NUP188-207ENST00000487952 ACOT6Q3I5F7 207 aaPredicted RBP10.66□□□□□ -0.7
NUP188-207ENST00000487952 LAMTOR1Q6IAA8 161 aa10.66□□□□□ -0.7
NUP188-207ENST00000487952 GATAD1Q8WUU5 269 aa10.66□□□□□ -0.7
NUP188-207ENST00000487952 ST8SIA2Q92186 375 aa10.66□□□□□ -0.7
NUP188-207ENST00000487952 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
NUP188-207ENST00000487952 H3BRN7 92 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 SERF2P84101 59 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 PATE2Q6UY27 113 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 ADAMTSL5Q6ZMM2 481 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 RBPMS2Q6ZRY4 209 aaKnown RBP10.65□□□□□ -0.7
NUP188-207ENST00000487952 SLC51BQ86UW2 128 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 OR8I2Q8N0Y5 310 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 OR2G3Q8NGZ4 309 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 RNF2Q99496 336 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 SHANK2-AS3Q9BTD1 123 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 SLC25A39Q9BZJ4 359 aaPredicted RBP10.65□□□□□ -0.7
NUP188-207ENST00000487952 SH3BGRL3Q9H299 93 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 SLC25A32Q9H2D1 315 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 SLC25A22Q9H936 323 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 MLXQ9UH92 298 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 U3KQE9 123 aa10.65□□□□□ -0.7
NUP188-207ENST00000487952 ZNF98A6NK75 572 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 BOLA2-SMG1P6H3BVE0 249 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 BUB3O43684 328 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 IGLV1-51P01701 117 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 MBP02144 154 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 CD5P06127 495 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 M6PRP20645 277 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
NUP188-207ENST00000487952 DEFB114Q30KQ6 69 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 AKR1C8PQ5T2L2 129 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 C1orf194Q5T5A4 169 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 LCN12Q6JVE5 192 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 C16orf54Q6UWD8 224 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 TCF24Q7RTU0 167 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 BAP18Q8IXM2 172 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 OR2K2Q8NGT1 345 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 TMEM37Q8WXS4 190 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 UHRF2Q96PU4 802 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 SCRT1Q9BWW7 348 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 ZMAT5Q9UDW3 170 aaKnown RBP10.64□□□□□ -0.71
NUP188-207ENST00000487952 RFNGQ9Y644 331 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 SELENOKQ9Y6D0 94 aa10.64□□□□□ -0.71
NUP188-207ENST00000487952 HELTA6NFD8 242 aa10.63□□□□□ -0.71
NUP188-207ENST00000487952 CD300EQ496F6 205 aaPredicted RBP10.63□□□□□ -0.71
NUP188-207ENST00000487952 GCSAMLQ5JQS6 135 aa10.63□□□□□ -0.71
NUP188-207ENST00000487952 FAM78BQ5VT40 261 aa10.63□□□□□ -0.71
NUP188-207ENST00000487952 EIF5AL1Q6IS14 154 aaKnown RBP10.63□□□□□ -0.71
NUP188-207ENST00000487952 STOML3Q8TAV4 291 aa10.63□□□□□ -0.71
NUP188-207ENST00000487952 MRPL32Q9BYC8 188 aaKnown RBP10.63□□□□□ -0.71
NUP188-207ENST00000487952 VWFP04275 2813 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 TRAV25A0A0B4J276 109 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 A0A1W2PPV4 95 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 SEC11BP0C7V7 166 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 SPP1P10451 314 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 GALR1P47211 349 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 RHOBP62745 196 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 GUCA2BQ16661 112 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 LEMD1Q68G75 181 aa10.62□□□□□ -0.71
NUP188-207ENST00000487952 FAM122CQ6P4D5 195 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms