RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 IGHV3-66A0A0C4DH42 116 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 CHEK1O14757 476 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 COX7A2P2O60397 106 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 HYPMO75409 117 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 RPL11P62913 178 aaKnown RBP8.62□□□□□ -1.03
NUP50-216ENST00000486184 BEAN1Q3B7T3 259 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 TCTE3Q8IZS6 198 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 STPG3Q8N7X2 389 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 ST8SIA2Q92186 375 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 ST6GAL2Q96JF0 529 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 GGTLC1Q9BX51 225 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 WDR61Q9GZS3 305 aaKnown RBP8.62□□□□□ -1.03
NUP50-216ENST00000486184 ARL6Q9H0F7 186 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 SLC45A2Q9UMX9 530 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 HIGD1AQ9Y241 93 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 ZNF256Q9Y2P7 627 aaPredicted RBP8.62□□□□□ -1.03
NUP50-216ENST00000486184 SELENOKQ9Y6D0 94 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 NOTCH3Q9UM47 2321 aa8.62□□□□□ -1.03
NUP50-216ENST00000486184 DNHD1Q96M86 4753 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 TRRAPQ9Y4A5 3859 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 TRAV25A0A0B4J276 109 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 A0A1B0GVG6 124 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 RNF222A6NCQ9 220 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 HELTA6NFD8 242 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 G3V3Q6 166 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 APOHP02749 345 aaPredicted RBP8.61□□□□□ -1.03
NUP50-216ENST00000486184 GP9P14770 177 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 RPL29P47914 159 aaKnown RBP8.61□□□□□ -1.03
NUP50-216ENST00000486184 B2MP61769 119 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 PAFAH1B2P68402 229 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 EGFEM1PQ0D2K5 195 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 OPCMLQ14982 345 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 MIC13Q5XKP0 118 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 TMEM182Q6ZP80 229 aaPredicted RBP8.61□□□□□ -1.03
NUP50-216ENST00000486184 TCF24Q7RTU0 167 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 TMEM61Q8N0U2 210 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 OR1L4Q8NGR5 311 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 PFDN5Q99471 154 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 RNF2Q99496 336 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 VSIRQ9H7M9 311 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 RNF24Q9Y225 148 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 PXMP4Q9Y6I8 212 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 MGAM2Q2M2H8 2515 aa8.61□□□□□ -1.03
NUP50-216ENST00000486184 IGKV3-7A0A075B6H7 116 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 ELOA3CA0A087WX78 387 aaPredicted RBP8.6□□□□□ -1.03
NUP50-216ENST00000486184 HMSDA8MTL9 139 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 TAAR5O14804 337 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 PLP1P60201 277 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 ZNF345Q14585 488 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 KPRPQ5T749 579 aaPredicted RBP8.6□□□□□ -1.03
NUP50-216ENST00000486184 C10orf113Q5VZT2 155 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 GTSCR1Q86UQ5 136 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 PARD6GQ9BYG4 376 aaPredicted RBP8.6□□□□□ -1.03
NUP50-216ENST00000486184 ARV1Q9H2C2 271 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 SLC25A22Q9H936 323 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 SLC39A9Q9NUM3 307 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 SORL1Q92673 2214 aa8.6□□□□□ -1.03
NUP50-216ENST00000486184 A0A0D9SG52 128 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 IZUMO1RA6ND01 250 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 OR4C46A6NHA9 309 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 DNASE2O00115 360 aaPredicted RBP8.59□□□□□ -1.03
NUP50-216ENST00000486184 TSPAN4O14817 238 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 PFDN1O60925 122 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 KRTAP10-11P60412 298 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 C1orf194Q5T5A4 169 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 C16orf54Q6UWD8 224 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 SIGLEC15Q6ZMC9 328 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 OR8I2Q8N0Y5 310 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 HSD17B11Q8NBQ5 300 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 STXBP6Q8NFX7 210 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 PRR25Q96S07 402 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 SPAG8Q99932 426 aaPredicted RBP8.59□□□□□ -1.03
NUP50-216ENST00000486184 ARPC5LQ9BPX5 153 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 RSG1Q9BU20 258 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 SLC25A39Q9BZJ4 359 aaPredicted RBP8.59□□□□□ -1.03
NUP50-216ENST00000486184 WFDC1Q9HC57 220 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 U3KQE9 123 aa8.59□□□□□ -1.03
NUP50-216ENST00000486184 H3BRN7 92 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 BUB3O43684 328 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 C1QBP02746 253 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 GALR1P47211 349 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 TFPI2P48307 235 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 ZFP69Q49AA0 526 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 FFAR4Q5NUL3 377 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 LINC00305Q7Z4B0 112 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 OR11H4Q8NGC9 324 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 HYLS1Q96M11 299 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 GPR82Q96P67 336 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 UHRF2Q96PU4 802 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 NEURL2Q9BR09 285 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 DNAJC4Q9NNZ3 241 aa8.58□□□□□ -1.04
NUP50-216ENST00000486184 ZNF98A6NK75 572 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 JTBO76095 146 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 ATF4P18848 351 aaPredicted RBP8.57□□□□□ -1.04
NUP50-216ENST00000486184 CD81P60033 236 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 RPL7L1Q6DKI1 246 aaKnown RBP8.57□□□□□ -1.04
NUP50-216ENST00000486184 GBGT1Q8N5D6 347 aa8.57□□□□□ -1.04
NUP50-216ENST00000486184 KCNRGQ8N5I3 272 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms