RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 RPP25LQ8N5L8 163 aaKnown RBP8.76□□□□□ -1.01
SQSTM1-207ENST00000481335 COQ8AQ8NI60 647 aa8.76□□□□□ -1.01
SQSTM1-207ENST00000481335 GPR82Q96P67 336 aa8.76□□□□□ -1.01
SQSTM1-207ENST00000481335 CLEC5AQ9NY25 188 aa8.76□□□□□ -1.01
SQSTM1-207ENST00000481335 APLNQ9ULZ1 77 aa8.76□□□□□ -1.01
SQSTM1-207ENST00000481335 VPS13DQ5THJ4 4388 aa8.76□□□□□ -1.01
SQSTM1-207ENST00000481335 IGKV1OR2-108A0A075B7D4 117 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 CCDC160A6NGH7 325 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 ZNF705FA8MVS1 300 aaPredicted RBP8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 ZNF705DP0CH99 300 aaPredicted RBP8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 ZNF705BP0CI00 300 aaPredicted RBP8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 IAPPP10997 89 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 GALR1P47211 349 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 Q6ZTC4 211 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 OR8I2Q8N0Y5 310 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 BPIFCQ8NFQ6 507 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 OR4D5Q8NGN0 318 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 PPP1R14BQ96C90 147 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 XCL2Q9UBD3 114 aa8.75□□□□□ -1.01
SQSTM1-207ENST00000481335 IGHV4-4A0A075B6R2 117 aa8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 DEDDO75618 318 aa8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 S100A7AQ86SG5 101 aa8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 WDR12Q9GZL7 423 aaKnown RBP8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 SRRQ9GZT4 340 aa8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 RBM38Q9H0Z9 239 aaKnown RBP8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 RPRMQ9NS64 109 aa8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 PAIP2BQ9ULR5 123 aaKnown RBP8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 STRAPQ9Y3F4 350 aaKnown RBP8.74□□□□□ -1.01
SQSTM1-207ENST00000481335 WRBO00258 174 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 NDUFB6O95139 128 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 HOXB5P09067 269 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 INPP1P49441 399 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 ID3Q02535 119 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 CNPY1Q3B7I2 92 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 TRIQKQ629K1 86 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 EBLN2Q6P2I7 272 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 TMEM144Q7Z5S9 345 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 ZNF709Q8N972 641 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 OR1B1Q8NGR6 318 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 FAM210BQ96KR6 192 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 LINC00052Q96N35 136 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 C7orf50Q9BRJ6 194 aaKnown RBP8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 RNF24Q9Y225 148 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 RFNGQ9Y644 331 aa8.73□□□□□ -1.01
SQSTM1-207ENST00000481335 DNAH10Q8IVF4 4471 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 DEFB131BA0A096LNP1 70 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 C9orf170A2RU37 121 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 ZNF98A6NK75 572 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 A8MTW9 85 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 FNDC10F2Z333 226 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 IFNA21P01568 189 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 SPART-AS1P0CW21 52 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 PSG9Q00887 426 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 AKR1C1Q04828 323 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 OR2F1Q13607 317 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 C12orf74Q32Q52 190 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 SPANXN5Q5MJ07 72 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 GDF5OSQ5U4N7 250 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 TMEM147Q9BVK8 224 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 CELA1Q9UNI1 258 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 GOLT1BQ9Y3E0 138 aa8.72□□□□□ -1.01
SQSTM1-207ENST00000481335 HECTD4Q9Y4D8 3996 aa8.71□□□□□ -1.01
SQSTM1-207ENST00000481335 A0A0J9YX75 114 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 CENPXA8MT69 81 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 P0DMU3 169 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 FAM231AP0DMU4 169 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 FAM231CP0DMU5 169 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 SELENOTP62341 195 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 PRR20EP86478 221 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 PRR20CP86479 221 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 PRR20DP86480 221 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 PRR20BP86481 221 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 PRR20AP86496 221 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 OXA1LQ15070 435 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 ACOT7LQ6ZUV0 252 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 C16orf92Q96LL3 132 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 MAGT1Q9H0U3 335 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 SLC25A32Q9H2D1 315 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 DOK5Q9P104 306 aa8.71□□□□□ -1.02
SQSTM1-207ENST00000481335 OR4E1P0C645 316 aa8.7□□□□□ -1.02
SQSTM1-207ENST00000481335 RPL7P18124 248 aaKnown RBP8.7□□□□□ -1.02
SQSTM1-207ENST00000481335 TAS2R30P59541 319 aa8.7□□□□□ -1.02
SQSTM1-207ENST00000481335 PLP1P60201 277 aa8.7□□□□□ -1.02
SQSTM1-207ENST00000481335 RAP2BP61225 183 aa8.7□□□□□ -1.02
SQSTM1-207ENST00000481335 OR4B1Q8NGF8 309 aa8.7□□□□□ -1.02
SQSTM1-207ENST00000481335 SMIM8Q96KF7 97 aa8.7□□□□□ -1.02
SQSTM1-207ENST00000481335 SLC25A22Q9H936 323 aa8.7□□□□□ -1.02
SQSTM1-207ENST00000481335 H3BP45 60 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 H3BRN7 92 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 K7EPK0 472 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 ADAP1O75689 374 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 DUSP14O95147 198 aaKnown RBP8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 HBE1P02100 147 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 ORM2P19652 201 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 B2MP61769 119 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 DLK1P80370 383 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.69□□□□□ -1.02
SQSTM1-207ENST00000481335 CYP2G1PQ6ZSU1 146 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms