RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 Q8N1Y9 231 aa14.8□□□□□ -0.04
LIME1-205ENST00000480139 ATP5SQ99766 215 aa14.8□□□□□ -0.04
LIME1-205ENST00000480139 TRAV2A0A0B4J234 112 aa14.79□□□□□ -0.04
LIME1-205ENST00000480139 OR4C46A6NHA9 309 aa14.79□□□□□ -0.04
LIME1-205ENST00000480139 G3V3Q6 166 aa14.79□□□□□ -0.04
LIME1-205ENST00000480139 ORM2P19652 201 aa14.79□□□□□ -0.04
LIME1-205ENST00000480139 RPL29P47914 159 aaKnown RBP14.79□□□□□ -0.04
LIME1-205ENST00000480139 CLINT1Q14677 625 aa14.79□□□□□ -0.04
LIME1-205ENST00000480139 STPG3Q8N7X2 389 aa14.79□□□□□ -0.04
LIME1-205ENST00000480139 GGTLC1Q9BX51 225 aa14.79□□□□□ -0.04
LIME1-205ENST00000480139 HYPMO75409 117 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 FGF7P21781 194 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 AP2S1P53680 142 aaPredicted RBP14.78□□□□□ -0.04
LIME1-205ENST00000480139 PAFAH1B2P68402 229 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 PRR20EP86478 221 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 PRR20CP86479 221 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 PRR20DP86480 221 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 PRR20BP86481 221 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 PRR20AP86496 221 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 OPCMLQ14982 345 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 S100A7AQ86SG5 101 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 OR1B1Q8NGR6 318 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 NEURL2Q9BR09 285 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 FBXL17Q9UF56 701 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 SMAD5-AS1Q9Y6J3 95 aa14.78□□□□□ -0.04
LIME1-205ENST00000480139 CD81P60033 236 aa14.77□□□□□ -0.05
LIME1-205ENST00000480139 PPP1R14BQ96C90 147 aa14.77□□□□□ -0.05
LIME1-205ENST00000480139 FAM110AQ9BQ89 295 aa14.77□□□□□ -0.05
LIME1-205ENST00000480139 NPCDR1Q9BY65 106 aa14.77□□□□□ -0.05
LIME1-205ENST00000480139 PARD6GQ9BYG4 376 aaPredicted RBP14.77□□□□□ -0.05
LIME1-205ENST00000480139 WDR61Q9GZS3 305 aaKnown RBP14.77□□□□□ -0.05
LIME1-205ENST00000480139 TNFSF18Q9UNG2 199 aa14.77□□□□□ -0.05
LIME1-205ENST00000480139 HIGD1AQ9Y241 93 aa14.77□□□□□ -0.05
LIME1-205ENST00000480139 CD7P09564 240 aa14.76□□□□□ -0.05
LIME1-205ENST00000480139 SIGLEC15Q6ZMC9 328 aa14.76□□□□□ -0.05
LIME1-205ENST00000480139 INO80EQ8NBZ0 244 aaPredicted RBP14.76□□□□□ -0.05
LIME1-205ENST00000480139 ARL6Q9H0F7 186 aa14.76□□□□□ -0.05
LIME1-205ENST00000480139 MS4A6AQ9H2W1 248 aa14.76□□□□□ -0.05
LIME1-205ENST00000480139 KCNIP2Q9NS61 270 aa14.76□□□□□ -0.05
LIME1-205ENST00000480139 RNF24Q9Y225 148 aa14.76□□□□□ -0.05
LIME1-205ENST00000480139 ELOA3CA0A087WX78 387 aaPredicted RBP14.75□□□□□ -0.05
LIME1-205ENST00000480139 FXYD6-FXYD2A0A087WZ82 144 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 ZNF98A6NK75 572 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 A8MZ25 164 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 H3BRN7 92 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 RPL11P62913 178 aaKnown RBP14.75□□□□□ -0.05
LIME1-205ENST00000480139 MIC13Q5XKP0 118 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 Q6ZRG5 221 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 GPR82Q96P67 336 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 SHANK2-AS3Q9BTD1 123 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 SLC25A39Q9BZJ4 359 aaPredicted RBP14.75□□□□□ -0.05
LIME1-205ENST00000480139 ARV1Q9H2C2 271 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 DOK5Q9P104 306 aa14.75□□□□□ -0.05
LIME1-205ENST00000480139 RNF222A6NCQ9 220 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 IFNA5P01569 189 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 OR5G3P0C626 314 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 CMC4P56277 68 aaPredicted RBP14.74□□□□□ -0.05
LIME1-205ENST00000480139 B2MP61769 119 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 DEFB121Q5J5C9 76 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 PATE2Q6UY27 113 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 SMIM3Q9BZL3 60 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 SLC39A9Q9NUM3 307 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 C19orf73Q9NVV2 129 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 PXMP4Q9Y6I8 212 aa14.74□□□□□ -0.05
LIME1-205ENST00000480139 IGKV3-7A0A075B6H7 116 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 C17orf112F2Z3M2 114 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 DNASE2O00115 360 aaPredicted RBP14.73□□□□□ -0.05
LIME1-205ENST00000480139 COX7A2P2O60397 106 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 OR8I2Q8N0Y5 310 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 GBGT1Q8N5D6 347 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 STXBP6Q8NFX7 210 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 OR1L4Q8NGR5 311 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 DCANP1Q8TF63 244 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 PFDN5Q99471 154 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 WFDC1Q9HC57 220 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 NRN1Q9NPD7 142 aa14.73□□□□□ -0.05
LIME1-205ENST00000480139 OR11H12B2RN74 326 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 K7EQG2 157 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 IGHV4-30-4P0DP06 118 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 ZNF266Q14584 549 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 ODF3L2Q3SX64 289 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 C10orf113Q5VZT2 155 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 ZNF709Q8N972 641 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 TMEM37Q8WXS4 190 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 UHRF2Q96PU4 802 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 SCRT1Q9BWW7 348 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 DNAJC4Q9NNZ3 241 aa14.72□□□□□ -0.05
LIME1-205ENST00000480139 TFPI2P48307 235 aa14.71□□□□□ -0.05
LIME1-205ENST00000480139 LINC00305Q7Z4B0 112 aa14.71□□□□□ -0.05
LIME1-205ENST00000480139 SCGB1C1Q8TD33 95 aa14.71□□□□□ -0.05
LIME1-205ENST00000480139 SLC25A32Q9H2D1 315 aa14.71□□□□□ -0.05
LIME1-205ENST00000480139 SLC25A22Q9H936 323 aa14.71□□□□□ -0.05
LIME1-205ENST00000480139 SEPSECSQ9HD40 501 aaKnown RBP14.71□□□□□ -0.05
LIME1-205ENST00000480139 PRKDCP78527 4128 aaKnown RBP14.71□□□□□ -0.05
LIME1-205ENST00000480139 RPL7P18124 248 aaKnown RBP14.7□□□□□ -0.06
LIME1-205ENST00000480139 GALR1P47211 349 aa14.7□□□□□ -0.06
LIME1-205ENST00000480139 GATAD1Q8WUU5 269 aa14.7□□□□□ -0.06
LIME1-205ENST00000480139 ST6GAL2Q96JF0 529 aa14.7□□□□□ -0.06
LIME1-205ENST00000480139 HMSDA8MTL9 139 aa14.69□□□□□ -0.06
LIME1-205ENST00000480139 SMLR1H3BR10 107 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms