RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RPL29P47914 159 aaKnown RBP11.6□□□□□ -0.55
SEC13-215ENST00000477547 INSL3P51460 131 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PRR20EP86478 221 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PRR20CP86479 221 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PRR20DP86480 221 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PRR20BP86481 221 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PRR20AP86496 221 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 OXLD1Q5BKU9 147 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 RPL7L1Q6DKI1 246 aaKnown RBP11.6□□□□□ -0.55
SEC13-215ENST00000477547 HSD17B11Q8NBQ5 300 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 ST8SIA2Q92186 375 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PPP1R14BQ96C90 147 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 ARPC5LQ9BPX5 153 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 ARL6Q9H0F7 186 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 TMEM231Q9H6L2 316 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 SLC39A9Q9NUM3 307 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 MLXQ9UH92 298 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 SMPXQ9UHP9 88 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 SELENOKQ9Y6D0 94 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 KANTRA0A1W2PQU2 76 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 BCL2L11O43521 198 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 COX7A2P2O60397 106 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 IGLV1-51P01701 117 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
SEC13-215ENST00000477547 OR5G3P0C626 314 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PLP1P60201 277 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 PXDC1Q5TGL8 231 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 GRAMD2BQ96HH9 432 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 RHPN1-AS1Q9BWJ2 59 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 HIGD1AQ9Y241 93 aa11.6□□□□□ -0.55
SEC13-215ENST00000477547 A0A1W2PS18 150 aa11.59□□□□□ -0.55
SEC13-215ENST00000477547 G3V4G9 280 aa11.59□□□□□ -0.55
SEC13-215ENST00000477547 CHEK1O14757 476 aa11.59□□□□□ -0.55
SEC13-215ENST00000477547 HYPMO75409 117 aa11.59□□□□□ -0.55
SEC13-215ENST00000477547 SAMD5Q5TGI4 173 aa11.59□□□□□ -0.55
SEC13-215ENST00000477547 Q6ZRG5 221 aa11.59□□□□□ -0.55
SEC13-215ENST00000477547 TECRQ9NZ01 308 aaKnown RBP11.59□□□□□ -0.55
SEC13-215ENST00000477547 PFDN2Q9UHV9 154 aa11.59□□□□□ -0.55
SEC13-215ENST00000477547 SORL1Q92673 2214 aa11.58□□□□□ -0.56
SEC13-215ENST00000477547 CD300EQ496F6 205 aaPredicted RBP11.58□□□□□ -0.56
SEC13-215ENST00000477547 TMUB2Q71RG4 321 aa11.58□□□□□ -0.56
SEC13-215ENST00000477547 UHRF2Q96PU4 802 aa11.58□□□□□ -0.56
SEC13-215ENST00000477547 RNF2Q99496 336 aa11.58□□□□□ -0.56
SEC13-215ENST00000477547 ARV1Q9H2C2 271 aa11.58□□□□□ -0.56
SEC13-215ENST00000477547 VSIRQ9H7M9 311 aa11.58□□□□□ -0.56
SEC13-215ENST00000477547 TIMM9Q9Y5J7 89 aa11.58□□□□□ -0.56
SEC13-215ENST00000477547 U3KQE9 123 aa11.58□□□□□ -0.56
SEC13-215ENST00000477547 H3BRN7 92 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 JTBO76095 146 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 ATP6V0CP27449 155 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 S100A7P31151 101 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 DEFB114Q30KQ6 69 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 FFAR4Q5NUL3 377 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 C10orf113Q5VZT2 155 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 LCN12Q6JVE5 192 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 TMEM61Q8N0U2 210 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 C9orf62Q8N4C0 152 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 OR2K2Q8NGT1 345 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 PFDN5Q99471 154 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 SCRT1Q9BWW7 348 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 ZNF471Q9BX82 626 aaPredicted RBP11.57□□□□□ -0.56
SEC13-215ENST00000477547 SH3BGRL3Q9H299 93 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 CYTL1Q9NRR1 136 aa11.57□□□□□ -0.56
SEC13-215ENST00000477547 ELOA3CA0A087WX78 387 aaPredicted RBP11.56□□□□□ -0.56
SEC13-215ENST00000477547 BUB3O43684 328 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
SEC13-215ENST00000477547 LGALSLQ3ZCW2 172 aaPredicted RBP11.56□□□□□ -0.56
SEC13-215ENST00000477547 GCSAMLQ5JQS6 135 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 TCF24Q7RTU0 167 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 S100A7AQ86SG5 101 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 PSMG3Q9BT73 122 aaPredicted RBP11.56□□□□□ -0.56
SEC13-215ENST00000477547 SHANK2-AS3Q9BTD1 123 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
SEC13-215ENST00000477547 SLC25A22Q9H936 323 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 RFNGQ9Y644 331 aa11.56□□□□□ -0.56
SEC13-215ENST00000477547 IZUMO1RA6ND01 250 aa11.55□□□□□ -0.56
SEC13-215ENST00000477547 LEMD1Q68G75 181 aa11.55□□□□□ -0.56
SEC13-215ENST00000477547 C16orf54Q6UWD8 224 aa11.55□□□□□ -0.56
SEC13-215ENST00000477547 RBPMS2Q6ZRY4 209 aaKnown RBP11.55□□□□□ -0.56
SEC13-215ENST00000477547 LINC00305Q7Z4B0 112 aa11.55□□□□□ -0.56
SEC13-215ENST00000477547 TMEM37Q8WXS4 190 aa11.55□□□□□ -0.56
SEC13-215ENST00000477547 GNPNAT1Q96EK6 184 aaPredicted RBP11.55□□□□□ -0.56
SEC13-215ENST00000477547 IGKV3-7A0A075B6H7 116 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 HELTA6NFD8 242 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 ZNF98A6NK75 572 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 C1orf194Q5T5A4 169 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 LAMTOR1Q6IAA8 161 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 SIGLEC15Q6ZMC9 328 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 OR8I2Q8N0Y5 310 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 OR2G3Q8NGZ4 309 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 GATAD1Q8WUU5 269 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 SLC25A32Q9H2D1 315 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 DNAJC4Q9NNZ3 241 aa11.54□□□□□ -0.56
SEC13-215ENST00000477547 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 BOLA2-SMG1P6H3BVE0 249 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 CD5P06127 495 aa11.53□□□□□ -0.56
SEC13-215ENST00000477547 C4BPBP20851 252 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms