RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 SCN10AQ9Y5Y9 1956 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 CCL16O15467 120 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 GGCTO75223 188 aaKnown RBP1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 CAPZBP47756 277 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 UBE2BP63146 152 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 C2orf82Q6UX34 121 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 OR10K1Q8NGX5 313 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 CEP19Q96LK0 163 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 ARL5AQ9Y689 179 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 LY96Q9Y6Y9 160 aa1.09□□□□□ -2.23
PRPF40A-208ENST00000472760 ARHGEF28Q8N1W1 1705 aaKnown RBP1.09□□□□□ -2.24
PRPF40A-208ENST00000472760 ROS1P08922 2347 aa1.09□□□□□ -2.24
PRPF40A-208ENST00000472760 EXPH5Q8NEV8 1989 aa1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 ADGRL3Q9HAR2 1447 aa1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 BANF1O75531 89 aa1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 CANT1Q8WVQ1 401 aa1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 PATE1Q8WXA2 126 aa1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 TP53RKQ96S44 253 aa1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 AMELYQ99218 206 aa1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 TAS2R7Q9NYW3 318 aa1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 CHCHD2Q9Y6H1 151 aaPredicted RBP1.08□□□□□ -2.24
PRPF40A-208ENST00000472760 TNS3Q68CZ2 1445 aa1.07□□□□□ -2.24
PRPF40A-208ENST00000472760 TRBV6-4A0A1B0GX49 114 aa1.07□□□□□ -2.24
PRPF40A-208ENST00000472760 CCL25O15444 150 aa1.07□□□□□ -2.24
PRPF40A-208ENST00000472760 NCALDP61601 193 aa1.07□□□□□ -2.24
PRPF40A-208ENST00000472760 SPRNQ5BIV9 151 aa1.07□□□□□ -2.24
PRPF40A-208ENST00000472760 C4orf22Q6V702 233 aa1.07□□□□□ -2.24
PRPF40A-208ENST00000472760 OR5D14Q8NGL3 314 aa1.07□□□□□ -2.24
PRPF40A-208ENST00000472760 KIF1BO60333 1816 aa1.07□□□□□ -2.24
PRPF40A-208ENST00000472760 KDM6AO15550 1401 aaPredicted RBP1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 MIA2Q96PC5 1412 aa1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 TMEM256-PLSCR3K7ERE1 68 aa1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 M0R378 163 aa1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 EIF5AL1Q6IS14 154 aaKnown RBP1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 PXT1Q8NFP0 134 aa1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 ORMDL1Q9P0S3 153 aa1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 TMEM14CQ9P0S9 112 aa1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 PCTPQ9UKL6 214 aa1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 PYCARDQ9ULZ3 195 aa1.06□□□□□ -2.24
PRPF40A-208ENST00000472760 TRAV10A0A0B4J240 114 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 G3V2T6 193 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 NDUFC2O95298 119 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 C1QBP02746 253 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 CD2P06729 351 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 DYNLT3P51808 116 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 ROMO1P60602 79 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 LINC00322Q6ZN03 302 aaPredicted RBP1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 NPCDR1Q9BY65 106 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 DENND4CQ5VZ89 1909 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 ARHGEF11O15085 1522 aa1.05□□□□□ -2.24
PRPF40A-208ENST00000472760 NCR3O14931 201 aa1.04□□□□□ -2.24
PRPF40A-208ENST00000472760 HLA-EP13747 358 aa1.04□□□□□ -2.24
PRPF40A-208ENST00000472760 PSG9Q00887 426 aa1.04□□□□□ -2.24
PRPF40A-208ENST00000472760 HACD4Q5VWC8 232 aa1.04□□□□□ -2.24
PRPF40A-208ENST00000472760 TEX37Q96LM6 180 aa1.04□□□□□ -2.24
PRPF40A-208ENST00000472760 MED29Q9NX70 200 aa1.04□□□□□ -2.24
PRPF40A-208ENST00000472760 EML6Q6ZMW3 1958 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 IGHV1-58A0A0C4DH39 117 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 TLCD2A6NGC4 264 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 ATG12O94817 140 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 NFYBP25208 207 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 DSCR4P56555 118 aaPredicted RBP1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 ARF6P62330 175 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 DHRS4L2Q6PKH6 230 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 ZNF833PQ6ZTB9 187 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 LINC00052Q96N35 136 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 CAMSAP1Q5T5Y3 1602 aa1.03□□□□□ -2.24
PRPF40A-208ENST00000472760 CEP192Q8TEP8 1941 aa1.03□□□□□ -2.25
PRPF40A-208ENST00000472760 DUXBA0A1W2PPF3 345 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 E7EUB6 86 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 C17orf112F2Z3M2 114 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 AIPO00170 330 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 NUPR1O60356 82 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 HOXA6P31267 233 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 GKN2Q86XP6 184 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 IFT20Q8IY31 132 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 PRNDQ9UKY0 176 aa1.02□□□□□ -2.25
PRPF40A-208ENST00000472760 KLF7O75840 302 aaPredicted RBP1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 ERC2-IT1O76042 136 aa1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 GNG5P63218 68 aa1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 BASP1P80723 227 aaKnown RBP1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 CDK6Q00534 326 aa1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 SCGB2B2Q4G0G5 96 aa1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 TEN1Q86WV5 123 aa1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 ZNF431Q8TF32 576 aaPredicted RBP1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 MUCL1Q96DR8 90 aa1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 OR2J1Q9GZK6 312 aa1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 NCOA6Q14686 2063 aaPredicted RBP1.01□□□□□ -2.25
PRPF40A-208ENST00000472760 B4DSR2 109 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 H7C1C5 153 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 M0R233 179 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 OR10J4P0C629 311 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 PHBP35232 272 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 LCN6P62502 163 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 AKR1C8PQ5T2L2 129 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 EXOC3-AS1Q8N2X6 119 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 PLPP5Q8NEB5 264 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 OR5D16Q8NGK9 328 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 POP5Q969H6 163 aaKnown RBP1□□□□□ -2.25
PRPF40A-208ENST00000472760 ZNF714Q96N38 554 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms