RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PRR20DP86480 221 aa11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 PRR20BP86481 221 aa11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 PRR20AP86496 221 aa11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 OPCMLQ14982 345 aa11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 RBPMS2Q6ZRY4 209 aaKnown RBP11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 INO80EQ8NBZ0 244 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 SPAG8Q99932 426 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 NPCDR1Q9BY65 106 aa11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 PARD6GQ9BYG4 376 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 WDR61Q9GZS3 305 aaKnown RBP11.23□□□□□ -0.61
CDC42SE1-203ENST00000470278 IGHV3-49A0A0A0MS15 119 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 RNF222A6NCQ9 220 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 ZNF785A8K8V0 405 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 FGF7P21781 194 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 RPL29P47914 159 aaKnown RBP11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 C1orf194Q5T5A4 169 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 C16orf54Q6UWD8 224 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 MRAPQ8TCY5 172 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 KCNIP2Q9NS61 270 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 FBXL17Q9UF56 701 aa11.22□□□□□ -0.61
CDC42SE1-203ENST00000470278 IGHV3OR16-13A0A075B7E8 117 aa11.21□□□□□ -0.61
CDC42SE1-203ENST00000470278 IGHV3-74A0A0B4J1X5 117 aa11.21□□□□□ -0.61
CDC42SE1-203ENST00000470278 K7EIL1 84 aa11.21□□□□□ -0.61
CDC42SE1-203ENST00000470278 S100A7AQ86SG5 101 aa11.21□□□□□ -0.61
CDC42SE1-203ENST00000470278 TCTE3Q8IZS6 198 aa11.21□□□□□ -0.61
CDC42SE1-203ENST00000470278 STPG3Q8N7X2 389 aa11.21□□□□□ -0.61
CDC42SE1-203ENST00000470278 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.61
CDC42SE1-203ENST00000470278 ST6GAL2Q96JF0 529 aa11.21□□□□□ -0.61
CDC42SE1-203ENST00000470278 ELOA3CA0A087WX78 387 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 TRAV2A0A0B4J234 112 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 IGHV3-66A0A0C4DH42 116 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 HELTA6NFD8 242 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 HYPMO75409 117 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 ORM2P19652 201 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 B2MP61769 119 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 ZNF266Q14584 549 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 TCF24Q7RTU0 167 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 GTSCR1Q86UQ5 136 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 PRR25Q96S07 402 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 NEURL2Q9BR09 285 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 HIGD1AQ9Y241 93 aa11.2□□□□□ -0.62
CDC42SE1-203ENST00000470278 DYNC2H1Q8NCM8 4307 aaKnown RBP11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 OR4C46A6NHA9 309 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 HMSDA8MTL9 139 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 SMLR1H3BR10 107 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 H3BRN7 92 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 IFNA5P01569 189 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 AP2S1P53680 142 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 ZNF345Q14585 488 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 GUCA2BQ16661 112 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 MIC13Q5XKP0 118 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 Q6ZRG5 221 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 SHANK2-AS3Q9BTD1 123 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 SLC25A39Q9BZJ4 359 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 SMIM3Q9BZL3 60 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 ARL6Q9H0F7 186 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 ARV1Q9H2C2 271 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 WFDC1Q9HC57 220 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 SLC39A9Q9NUM3 307 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 SELENOKQ9Y6D0 94 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
CDC42SE1-203ENST00000470278 C17orf112F2Z3M2 114 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 ARPC5O15511 151 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 SIGLEC15Q6ZMC9 328 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 AKAP14Q86UN6 197 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 ZNF709Q8N972 641 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 PPP1R14BQ96C90 147 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 GPR82Q96P67 336 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 PFDN5Q99471 154 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 FAM110AQ9BQ89 295 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 DOK5Q9P104 306 aa11.18□□□□□ -0.62
CDC42SE1-203ENST00000470278 hCG_2014768A0A024R1R8 64 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 ZNF98A6NK75 572 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 OR5G3P0C626 314 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 PAFAH1B2P68402 229 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 Q8N1Y9 231 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 OR11H4Q8NGC9 324 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 OR1L4Q8NGR5 311 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 SCGB1C1Q8TD33 95 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 TMEM37Q8WXS4 190 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 UHRF2Q96PU4 802 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 SCRT1Q9BWW7 348 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 MFFQ9GZY8 342 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 MS4A6AQ9H2W1 248 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 TIMM9Q9Y5J7 89 aa11.17□□□□□ -0.62
CDC42SE1-203ENST00000470278 A0A1B0GVG6 124 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 TAAR5O14804 337 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 CD81P60033 236 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 C10orf113Q5VZT2 155 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 LINC00305Q7Z4B0 112 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 OR8I2Q8N0Y5 310 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 DCANP1Q8TF63 244 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 RSG1Q9BU20 258 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 SLC25A32Q9H2D1 315 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 DNAJC4Q9NNZ3 241 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms