RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PFDN2Q9UHV9 154 aa17.53■□□□□ 0.4
PTCH1-210ENST00000468211 IGHV3OR16-12A0A075B7B8 117 aa17.52■□□□□ 0.4
PTCH1-210ENST00000468211 PRSS46E5RG02 174 aa17.52■□□□□ 0.4
PTCH1-210ENST00000468211 F6UB75 175 aa17.52■□□□□ 0.4
PTCH1-210ENST00000468211 ID1P41134 155 aa17.52■□□□□ 0.4
PTCH1-210ENST00000468211 RAB11AP62491 216 aa17.52■□□□□ 0.4
PTCH1-210ENST00000468211 PPP1R1AQ13522 171 aa17.52■□□□□ 0.4
PTCH1-210ENST00000468211 C17orf77Q96MU5 243 aa17.52■□□□□ 0.4
PTCH1-210ENST00000468211 SLC35B3Q9H1N7 401 aa17.52■□□□□ 0.4
PTCH1-210ENST00000468211 FABP1P07148 127 aa17.51■□□□□ 0.39
PTCH1-210ENST00000468211 SLC25A6P12236 298 aa17.51■□□□□ 0.39
PTCH1-210ENST00000468211 EMP1P54849 157 aa17.51■□□□□ 0.39
PTCH1-210ENST00000468211 OR8I2Q8N0Y5 310 aa17.51■□□□□ 0.39
PTCH1-210ENST00000468211 OR4B1Q8NGF8 309 aa17.51■□□□□ 0.39
PTCH1-210ENST00000468211 COQ8AQ8NI60 647 aa17.51■□□□□ 0.39
PTCH1-210ENST00000468211 PPP1R14BQ96C90 147 aa17.51■□□□□ 0.39
PTCH1-210ENST00000468211 C20orf173Q96LM9 149 aa17.51■□□□□ 0.39
PTCH1-210ENST00000468211 WRBO00258 174 aa17.5■□□□□ 0.39
PTCH1-210ENST00000468211 SFT2D2O95562 160 aa17.5■□□□□ 0.39
PTCH1-210ENST00000468211 AP3S2P59780 193 aa17.5■□□□□ 0.39
PTCH1-210ENST00000468211 TMEM182Q6ZP80 229 aaPredicted RBP17.5■□□□□ 0.39
PTCH1-210ENST00000468211 CLUHP3Q96NS8 147 aa17.5■□□□□ 0.39
PTCH1-210ENST00000468211 FAT2Q9NYQ8 4349 aa17.5■□□□□ 0.39
PTCH1-210ENST00000468211 DNAH2Q9P225 4427 aa17.5■□□□□ 0.39
PTCH1-210ENST00000468211 DNAH17Q9UFH2 4485 aa17.49■□□□□ 0.39
PTCH1-210ENST00000468211 HOXB5P09067 269 aa17.49■□□□□ 0.39
PTCH1-210ENST00000468211 GATA2P23769 480 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-210ENST00000468211 FAM78BQ5VT40 261 aa17.49■□□□□ 0.39
PTCH1-210ENST00000468211 SLC25A21Q9BQT8 299 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-210ENST00000468211 SLC25A32Q9H2D1 315 aa17.49■□□□□ 0.39
PTCH1-210ENST00000468211 PLA2G2EQ9NZK7 142 aa17.49■□□□□ 0.39
PTCH1-210ENST00000468211 TMED3Q9Y3Q3 217 aa17.49■□□□□ 0.39
PTCH1-210ENST00000468211 KIAA1109Q2LD37 5005 aa17.48■□□□□ 0.39
PTCH1-210ENST00000468211 PIGBOS1A0A0B4J2F0 54 aa17.48■□□□□ 0.39
PTCH1-210ENST00000468211 ISLRO14498 428 aa17.48■□□□□ 0.39
PTCH1-210ENST00000468211 SYNGR2O43760 224 aa17.48■□□□□ 0.39
PTCH1-210ENST00000468211 MED6O75586 246 aa17.48■□□□□ 0.39
PTCH1-210ENST00000468211 PAX9P55771 341 aa17.48■□□□□ 0.39
PTCH1-210ENST00000468211 C1orf158Q8N1D5 194 aa17.48■□□□□ 0.39
PTCH1-210ENST00000468211 A0A0J9YX75 114 aa17.47■□□□□ 0.39
PTCH1-210ENST00000468211 SMIM9A6NGZ8 99 aa17.47■□□□□ 0.39
PTCH1-210ENST00000468211 SPART-AS1P0CW21 52 aa17.47■□□□□ 0.39
PTCH1-210ENST00000468211 GGNBP1Q5YKI7 109 aa17.47■□□□□ 0.39
PTCH1-210ENST00000468211 SLC25A22Q9H936 323 aa17.47■□□□□ 0.39
PTCH1-210ENST00000468211 H3BP45 60 aa17.46■□□□□ 0.39
PTCH1-210ENST00000468211 PSG9Q00887 426 aa17.46■□□□□ 0.39
PTCH1-210ENST00000468211 CCDC190Q86UF4 302 aa17.46■□□□□ 0.39
PTCH1-210ENST00000468211 CIB3Q96Q77 187 aaPredicted RBP17.46■□□□□ 0.39
PTCH1-210ENST00000468211 RSG1Q9BU20 258 aa17.46■□□□□ 0.39
PTCH1-210ENST00000468211 NDUFAF3Q9BU61 184 aa17.46■□□□□ 0.39
PTCH1-210ENST00000468211 DKK2Q9UBU2 259 aa17.46■□□□□ 0.39
PTCH1-210ENST00000468211 RFNGQ9Y644 331 aa17.46■□□□□ 0.39
PTCH1-210ENST00000468211 ZNF98A6NK75 572 aa17.45■□□□□ 0.38
PTCH1-210ENST00000468211 SPANXN5Q5MJ07 72 aa17.45■□□□□ 0.38
PTCH1-210ENST00000468211 SPATA31B1PQ5VZV4 182 aa17.45■□□□□ 0.38
PTCH1-210ENST00000468211 EBLN2Q6P2I7 272 aa17.45■□□□□ 0.38
PTCH1-210ENST00000468211 POM121L12Q8N7R1 296 aa17.45■□□□□ 0.38
PTCH1-210ENST00000468211 TMEM189A5PLL7 270 aa17.44■□□□□ 0.38
PTCH1-210ENST00000468211 ORM2P19652 201 aa17.44■□□□□ 0.38
PTCH1-210ENST00000468211 FAM222AQ5U5X8 452 aa17.44■□□□□ 0.38
PTCH1-210ENST00000468211 C16orf92Q96LL3 132 aa17.44■□□□□ 0.38
PTCH1-210ENST00000468211 ADAP1O75689 374 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 P0DMU3 169 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 FAM231AP0DMU4 169 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 FAM231CP0DMU5 169 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 GALR1P47211 349 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 RPP30P78346 268 aaKnown RBP17.43■□□□□ 0.38
PTCH1-210ENST00000468211 IGFL4Q6B9Z1 124 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 AMTNQ6UX39 209 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 ACOT7LQ6ZUV0 252 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 RPRMQ9NS64 109 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 SLC45A2Q9UMX9 530 aa17.43■□□□□ 0.38
PTCH1-210ENST00000468211 A8MTW9 85 aa17.42■□□□□ 0.38
PTCH1-210ENST00000468211 CFDP00746 253 aaPredicted RBP17.42■□□□□ 0.38
PTCH1-210ENST00000468211 S100A5P33763 92 aa17.42■□□□□ 0.38
PTCH1-210ENST00000468211 MEOX2P50222 304 aa17.42■□□□□ 0.38
PTCH1-210ENST00000468211 BPIFCQ8NFQ6 507 aa17.42■□□□□ 0.38
PTCH1-210ENST00000468211 DEDD2Q8WXF8 326 aa17.42■□□□□ 0.38
PTCH1-210ENST00000468211 DOK5Q9P104 306 aa17.42■□□□□ 0.38
PTCH1-210ENST00000468211 GOLT1BQ9Y3E0 138 aa17.42■□□□□ 0.38
PTCH1-210ENST00000468211 M0R2N4 97 aa17.41■□□□□ 0.38
PTCH1-210ENST00000468211 POLR2GP62487 172 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTCH1-210ENST00000468211 ID3Q02535 119 aa17.41■□□□□ 0.38
PTCH1-210ENST00000468211 AKR1C1Q04828 323 aa17.41■□□□□ 0.38
PTCH1-210ENST00000468211 OR1B1Q8NGR6 318 aa17.41■□□□□ 0.38
PTCH1-210ENST00000468211 NIPSNAP3BQ9BS92 247 aa17.41■□□□□ 0.38
PTCH1-210ENST00000468211 STRAPQ9Y3F4 350 aaKnown RBP17.41■□□□□ 0.38
PTCH1-210ENST00000468211 YTHDF2Q9Y5A9 579 aaKnown RBP17.41■□□□□ 0.38
PTCH1-210ENST00000468211 TRAV8-2A0A0B4J237 113 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 LOC102723971A0A1B0GUV8 181 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 A0A1B0GVY2 172 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 C9orf170A2RU37 121 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 CCDC160A6NGH7 325 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 OR4D5Q8NGN0 318 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 C7orf50Q9BRJ6 194 aaKnown RBP17.4■□□□□ 0.38
PTCH1-210ENST00000468211 SRRQ9GZT4 340 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 FLVCR2Q9UPI3 526 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 PKHD1P08F94 4074 aa17.4■□□□□ 0.38
PTCH1-210ENST00000468211 HBE1P02100 147 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms