RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 DOK5Q9P104 306 aa9.23□□□□□ -0.93
CHPF2-202ENST00000465601 STAB2Q8WWQ8 2551 aa9.23□□□□□ -0.93
CHPF2-202ENST00000465601 RBMY1BA6NDE4 496 aaKnown RBP9.22□□□□□ -0.93
CHPF2-202ENST00000465601 RBMY1EA6NEQ0 496 aaKnown RBP9.22□□□□□ -0.93
CHPF2-202ENST00000465601 AGPAT2O15120 278 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 RBMY1DP0C7P1 496 aaKnown RBP9.22□□□□□ -0.93
CHPF2-202ENST00000465601 SELENOTP62341 195 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 HBG1P69891 147 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 HBG2P69892 147 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 EWSR1Q01844 656 aaKnown RBP eCLIP9.22□□□□□ -0.93
CHPF2-202ENST00000465601 ODF3L2Q3SX64 289 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 OR1B1Q8NGR6 318 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 MGST2Q99735 147 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 TMEM147Q9BVK8 224 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 MBD2Q9UBB5 411 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 PFDN2Q9UHV9 154 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 SLC45A2Q9UMX9 530 aa9.22□□□□□ -0.93
CHPF2-202ENST00000465601 UBE2L5PA0A1B0GUS4 154 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 HELTA6NFD8 242 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 HYPMO75409 117 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 LINC00869P0C866 280 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 PET100P0DJ07 73 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 AP2S1P53680 142 aaPredicted RBP9.21□□□□□ -0.94
CHPF2-202ENST00000465601 ATP6V1FQ16864 119 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 VWC2Q2TAL6 325 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 SIGLEC15Q6ZMC9 328 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 FAM24BQ8N5W8 94 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 CITED4Q96RK1 184 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 WDR83OSQ9Y284 106 aa9.21□□□□□ -0.94
CHPF2-202ENST00000465601 TRAV2A0A0B4J234 112 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 ZNF98A6NK75 572 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 K7EQG2 157 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 OR5G3P0C626 314 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 NHLRC4P0CG21 123 aaPredicted RBP9.2□□□□□ -0.94
CHPF2-202ENST00000465601 NUP62P37198 522 aaPredicted RBP9.2□□□□□ -0.94
CHPF2-202ENST00000465601 CAMLGP49069 296 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 CMC4P56277 68 aaPredicted RBP9.2□□□□□ -0.94
CHPF2-202ENST00000465601 PLP1P60201 277 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 BAXQ07812 192 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 RAB31Q13636 194 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 CLINT1Q14677 625 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 ZNF124Q15973 351 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 HAGHQ16775 308 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 C1orf194Q5T5A4 169 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 LINC00322Q6ZN03 302 aaPredicted RBP9.2□□□□□ -0.94
CHPF2-202ENST00000465601 ZNF546Q86UE3 836 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 APRG1Q8IVJ8 170 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 OR8I2Q8N0Y5 310 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 OR5C1Q8NGR4 320 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 ARL6Q9H0F7 186 aa9.2□□□□□ -0.94
CHPF2-202ENST00000465601 FGF7P21781 194 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 RPL12P30050 165 aaKnown RBP9.19□□□□□ -0.94
CHPF2-202ENST00000465601 DEFB131AP59861 70 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 RAP2BP61225 183 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 MIC13Q5XKP0 118 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 LEMD1Q68G75 181 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 PATE2Q6UY27 113 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 THAP6Q8TBB0 222 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 DCANP1Q8TF63 244 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 FAM110AQ9BQ89 295 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 GGTLC1Q9BX51 225 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 SLC25A39Q9BZJ4 359 aaPredicted RBP9.19□□□□□ -0.94
CHPF2-202ENST00000465601 SLC25A22Q9H936 323 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 MAP6D1Q9H9H5 199 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 HIGD1AQ9Y241 93 aa9.19□□□□□ -0.94
CHPF2-202ENST00000465601 GIPP09681 153 aaPredicted RBP9.18□□□□□ -0.94
CHPF2-202ENST00000465601 ZNF688P0C7X2 276 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 LYL1P12980 280 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 S100A7P31151 101 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 Q5BKY6 102 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 UHRF2Q96PU4 802 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 SHANK2-AS3Q9BTD1 123 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 SCRT1Q9BWW7 348 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 SLC25A32Q9H2D1 315 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 NRN1Q9NPD7 142 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 FBXL17Q9UF56 701 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 HSPB11Q9Y547 144 aa9.18□□□□□ -0.94
CHPF2-202ENST00000465601 LOC102724200A0A096LPH7 203 aaPredicted RBP9.17□□□□□ -0.94
CHPF2-202ENST00000465601 H3BRN7 92 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 RPL35AP18077 110 aaKnown RBP9.17□□□□□ -0.94
CHPF2-202ENST00000465601 PRR20EP86478 221 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 PRR20CP86479 221 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 PRR20DP86480 221 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 PRR20BP86481 221 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 PRR20AP86496 221 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 OPCMLQ14982 345 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 PXDC1Q5TGL8 231 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 RSG1Q9BU20 258 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 SMIM3Q9BZL3 60 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 ARV1Q9H2C2 271 aa9.17□□□□□ -0.94
CHPF2-202ENST00000465601 COX7A2P2O60397 106 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 MPDU1O75352 247 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 GALR1P47211 349 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 RPL29P47914 159 aaKnown RBP9.16□□□□□ -0.94
CHPF2-202ENST00000465601 B2MP61769 119 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 Q6ZRG5 221 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 CHAC2Q8WUX2 184 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 TMEM37Q8WXS4 190 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 TM2D3Q9BRN9 247 aa9.16□□□□□ -0.94
CHPF2-202ENST00000465601 NPCDR1Q9BY65 106 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms