RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 KRTAP24-1Q3LI83 254 aa17.66■□□□□ 0.42
CPSF4-204ENST00000436336 HIST2H2BDQ6DRA6 164 aa17.66■□□□□ 0.42
CPSF4-204ENST00000436336 S100A7AQ86SG5 101 aa17.66■□□□□ 0.42
CPSF4-204ENST00000436336 MBD3L1Q8WWY6 194 aa17.66■□□□□ 0.42
CPSF4-204ENST00000436336 UHRF2Q96PU4 802 aa17.66■□□□□ 0.42
CPSF4-204ENST00000436336 FAM106AQ4KMX7 169 aa17.65■□□□□ 0.42
CPSF4-204ENST00000436336 AWAT1Q58HT5 328 aa17.65■□□□□ 0.42
CPSF4-204ENST00000436336 SPATA31B1PQ5VZV4 182 aa17.65■□□□□ 0.42
CPSF4-204ENST00000436336 OR11H1Q8NG94 326 aa17.65■□□□□ 0.42
CPSF4-204ENST00000436336 RABAC1Q9UI14 185 aa17.65■□□□□ 0.42
CPSF4-204ENST00000436336 SETD2Q9BYW2 2564 aaPredicted RBP17.65■□□□□ 0.42
CPSF4-204ENST00000436336 LINC01619G3V211 115 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 ZP3P21754 424 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 DEFB136Q30KP8 78 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 C8orf86Q6ZUL3 223 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 MIR17HGQ75NE6 70 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 SFT2D1Q8WV19 159 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 TMEM190Q8WZ59 177 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 SLC25A39Q9BZJ4 359 aaPredicted RBP17.64■□□□□ 0.41
CPSF4-204ENST00000436336 MAP1LC3B2A6NCE7 125 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 S100A7P31151 101 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 LCN15Q6UWW0 184 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 UNQ9165/PRO28630Q6UXU0 137 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 OR1N2Q8NGR9 330 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 DPF1Q92782 380 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 MAP1LC3BQ9GZQ8 125 aa17.64■□□□□ 0.41
CPSF4-204ENST00000436336 IGHV3OR16-8A0A075B7F1 116 aa17.63■□□□□ 0.41
CPSF4-204ENST00000436336 A0A1W2PRX2 142 aa17.63■□□□□ 0.41
CPSF4-204ENST00000436336 TEX46H3BTG2 121 aa17.63■□□□□ 0.41
CPSF4-204ENST00000436336 STAG3L2P0CL84 134 aa17.63■□□□□ 0.41
CPSF4-204ENST00000436336 STAG3L3P0CL85 134 aa17.63■□□□□ 0.41
CPSF4-204ENST00000436336 TAS2R45P59539 299 aa17.63■□□□□ 0.41
CPSF4-204ENST00000436336 LYPD6BQ8NI32 183 aa17.63■□□□□ 0.41
CPSF4-204ENST00000436336 C20orf24Q9BUV8 137 aa17.63■□□□□ 0.41
CPSF4-204ENST00000436336 TECRQ9NZ01 308 aaKnown RBP17.63■□□□□ 0.41
CPSF4-204ENST00000436336 TRAV1-1A0A0B4J248 108 aa17.62■□□□□ 0.41
CPSF4-204ENST00000436336 H3BRN7 92 aa17.62■□□□□ 0.41
CPSF4-204ENST00000436336 HMGB3O15347 200 aaKnown RBP17.62■□□□□ 0.41
CPSF4-204ENST00000436336 EIF3GO75821 320 aaKnown RBP eCLIP17.62■□□□□ 0.41
CPSF4-204ENST00000436336 HBE1P02100 147 aa17.62■□□□□ 0.41
CPSF4-204ENST00000436336 C8orf88P0DMB2 117 aa17.62■□□□□ 0.41
CPSF4-204ENST00000436336 HOXD3P31249 432 aaPredicted RBP17.62■□□□□ 0.41
CPSF4-204ENST00000436336 MORN5Q5VZ52 161 aa17.62■□□□□ 0.41
CPSF4-204ENST00000436336 METTL26Q96S19 204 aa17.62■□□□□ 0.41
CPSF4-204ENST00000436336 SHANK2-AS3Q9BTD1 123 aa17.62■□□□□ 0.41
CPSF4-204ENST00000436336 NDUFA11Q86Y39 141 aa17.61■□□□□ 0.41
CPSF4-204ENST00000436336 HRH4Q9H3N8 390 aa17.61■□□□□ 0.41
CPSF4-204ENST00000436336 ZNF320A2RRD8 509 aa17.61■□□□□ 0.41
CPSF4-204ENST00000436336 KHDC3LQ587J8 217 aa17.61■□□□□ 0.41
CPSF4-204ENST00000436336 REC114Q7Z4M0 266 aa17.61■□□□□ 0.41
CPSF4-204ENST00000436336 PFDN2Q9UHV9 154 aa17.61■□□□□ 0.41
CPSF4-204ENST00000436336 RNF24Q9Y225 148 aa17.61■□□□□ 0.41
CPSF4-204ENST00000436336 ADARB2-AS1A8MUL3 147 aa17.6■□□□□ 0.41
CPSF4-204ENST00000436336 LGALS9O00182 355 aa17.6■□□□□ 0.41
CPSF4-204ENST00000436336 NPPCP23582 126 aa17.6■□□□□ 0.41
CPSF4-204ENST00000436336 C1QL4Q86Z23 238 aa17.6■□□□□ 0.41
CPSF4-204ENST00000436336 SCRT1Q9BWW7 348 aa17.6■□□□□ 0.41
CPSF4-204ENST00000436336 SLC25A2Q9BXI2 301 aa17.6■□□□□ 0.41
CPSF4-204ENST00000436336 TRAV5A0A0B4J249 113 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 ZNF98A6NK75 572 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 K7EMT4 169 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 CXorf1O96002 111 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 CRYBB3P26998 211 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 FGF8P55075 233 aaPredicted RBP17.59■□□□□ 0.41
CPSF4-204ENST00000436336 FHL3Q13643 280 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 RAX2Q96IS3 184 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 FAM167A-AS1Q96KT0 104 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 UFC1Q9Y3C8 167 aa17.59■□□□□ 0.41
CPSF4-204ENST00000436336 A0A1B0GV50 99 aa17.58■□□□□ 0.41
CPSF4-204ENST00000436336 SLURP1P55000 103 aa17.58■□□□□ 0.41
CPSF4-204ENST00000436336 KLF5Q13887 457 aaPredicted RBP17.58■□□□□ 0.41
CPSF4-204ENST00000436336 PQLC2Q6ZP29 291 aa17.58■□□□□ 0.41
CPSF4-204ENST00000436336 DUX3Q96PT4 197 aa17.58■□□□□ 0.41
CPSF4-204ENST00000436336 DAZ1Q9NQZ3 744 aaKnown RBP17.58■□□□□ 0.41
CPSF4-204ENST00000436336 CCL24O00175 119 aa17.58■□□□□ 0.4
CPSF4-204ENST00000436336 ZNF207O43670 478 aaKnown RBP17.58■□□□□ 0.4
CPSF4-204ENST00000436336 ARL14EPLP0DKL9 152 aa17.58■□□□□ 0.4
CPSF4-204ENST00000436336 NSUN5P1Q3KNT7 163 aa17.58■□□□□ 0.4
CPSF4-204ENST00000436336 STXBP6Q8NFX7 210 aa17.58■□□□□ 0.4
CPSF4-204ENST00000436336 CITED1Q99966 193 aa17.58■□□□□ 0.4
CPSF4-204ENST00000436336 U3KQE9 123 aa17.58■□□□□ 0.4
CPSF4-204ENST00000436336 A8MWP6 167 aa17.57■□□□□ 0.4
CPSF4-204ENST00000436336 SYNJ2BPP57105 145 aa17.57■□□□□ 0.4
CPSF4-204ENST00000436336 LEMD1Q68G75 181 aa17.57■□□□□ 0.4
CPSF4-204ENST00000436336 NARS2Q96I59 477 aaKnown RBP17.57■□□□□ 0.4
CPSF4-204ENST00000436336 BUB3O43684 328 aa17.56■□□□□ 0.4
CPSF4-204ENST00000436336 OR7C2O60412 319 aa17.56■□□□□ 0.4
CPSF4-204ENST00000436336 IL34Q6ZMJ4 242 aa17.56■□□□□ 0.4
CPSF4-204ENST00000436336 CCL20P78556 96 aa17.55■□□□□ 0.4
CPSF4-204ENST00000436336 TM4SF20Q53R12 229 aa17.55■□□□□ 0.4
CPSF4-204ENST00000436336 ZNF503Q96F45 646 aa17.55■□□□□ 0.4
CPSF4-204ENST00000436336 OR51M1Q9H341 326 aa17.55■□□□□ 0.4
CPSF4-204ENST00000436336 BPIFA4PQ86YQ2 179 aa17.55■□□□□ 0.4
CPSF4-204ENST00000436336 TMEM158Q8WZ71 300 aa17.55■□□□□ 0.4
CPSF4-204ENST00000436336 PAXXQ9BUH6 204 aa17.55■□□□□ 0.4
CPSF4-204ENST00000436336 TMEM14CQ9P0S9 112 aa17.55■□□□□ 0.4
CPSF4-204ENST00000436336 IGHV7-4-1A0A0J9YVY3 117 aa17.54■□□□□ 0.4
CPSF4-204ENST00000436336 A0A1W2PS18 150 aa17.54■□□□□ 0.4
CPSF4-204ENST00000436336 APOHP02749 345 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-204ENST00000436336 GCHFRP30047 84 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms