RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 HCP5Q6MZN7 132 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 C3orf33Q6P1S2 294 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 Q6ZQT7 251 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 IDO2Q6ZQW0 420 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 DCXRQ7Z4W1 244 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 FAM19A1Q7Z5A9 133 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SLC51BQ86UW2 128 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 NAA40Q86UY6 237 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 LHFPL1Q86WI0 220 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR5AS1Q8N127 324 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SLC22A24Q8N4F4 322 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 KCNRGQ8N5I3 272 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 C12orf45Q8N5I9 185 aaPredicted RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 GATD1Q8NB37 220 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 LY6G5BQ8NDX9 201 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF738Q8NE65 137 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR2M3Q8NG83 312 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR1M1Q8NGA1 313 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR51D1Q8NGF3 324 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR51A4Q8NGJ6 313 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR5D14Q8NGL3 314 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR13C8Q8NGS7 320 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR2T35Q8NGX2 323 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR2AE1Q8NHA4 323 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CASTOR1Q8WTX7 329 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 C11orf40Q8WZ69 217 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 AQP3Q92482 292 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 DDIT4LQ96D03 193 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SLAMF6Q96DU3 332 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SLC25A44Q96H78 314 aaPredicted RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 ARL5BQ96KC2 179 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 PRRT1Q99946 306 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 DHRS9Q9BPW9 319 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 REG4Q9BYZ8 158 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TTTY10Q9BZA0 68 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 PBOV1Q9GZY1 135 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 ATG5Q9H1Y0 275 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 METTL17Q9H7H0 456 aaPredicted RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 WDR54Q9H977 334 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 PROK2Q9HC23 129 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM138Q9NPI0 162 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 IFT46Q9NQC8 304 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 MED11Q9P086 117 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CKLFQ9UBR5 152 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 GLS2Q9UI32 602 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 NAGKQ9UJ70 344 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 NXT1Q9UKK6 140 aaKnown RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR52A1Q9UKL2 312 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SLC22A13Q9Y226 551 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 HDGFL3Q9Y3E1 203 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 LHFPL6Q9Y693 200 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CHCHD2Q9Y6H1 151 aaPredicted RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 U3KQA8 63 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 V9GYS6 101 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 HEATR1Q9H583 2144 aaKnown RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 KNTC1P50748 2209 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CNTRLQ7Z7A1 2325 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TECTAO75443 2155 aa1.15□□□□□ -2.22
PTPRC-208ENST00000427110 CACNA1GO43497 2377 aa1.15□□□□□ -2.22
PTPRC-208ENST00000427110 PRUNE2Q8WUY3 3088 aa1.15□□□□□ -2.22
PTPRC-208ENST00000427110 KIAA2026Q5HYC2 2103 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 IGHV1-45A0A0A0MS14 117 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 IGKV1-9A0A0C4DH69 117 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 LOC105371267A0A1B0GV96 52 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 LOC107986453A0A1B0GWG9 222 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 A0A1B0GXF2 115 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 C9orf170A2RU37 121 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 PGPA6NDG6 321 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 OR5H14A6NHG9 310 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 C17orf51A8MQB3 221 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 A8MWP4 228 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF736B4DX44 427 aaPredicted RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 GGTLC3B5MD39 225 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 H3BMM0 161 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 TP53I11O14683 189 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 PSCAO43653 123 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 KLF7O75840 302 aaPredicted RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 SFT2D2O95562 160 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CYB5AP00167 134 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CRHP06850 196 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 GP1BAP07359 652 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CST2P09228 141 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CD79AP11912 226 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 COX6A1P12074 109 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CCL2P13500 99 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 HIST1H1DP16402 221 aaKnown RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CRYGSP22914 178 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF93P35789 620 aaPredicted RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 RPS27P42677 84 aaKnown RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 DSCR4P56555 118 aaPredicted RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 RAB14P61106 215 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 UBA52P62987 128 aaKnown RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CCL7P80098 99 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 FOXF1Q12946 379 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 DHRS2Q13268 280 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 OR2F1Q13607 317 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 KISS1Q15726 138 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 Q3ZCU0 254 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM128Q5BJH2 165 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 RNASE10Q5GAN6 216 aaKnown RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms