RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 NPVFQ9HCQ7 196 aa12.08□□□□□ -0.48
NOD1-202ENST00000411552 LYRM2Q9NU23 88 aaPredicted RBP12.08□□□□□ -0.48
NOD1-202ENST00000411552 IGSF23A1L1A6 192 aa12.07□□□□□ -0.48
NOD1-202ENST00000411552 RPL35AP18077 110 aaKnown RBP12.07□□□□□ -0.48
NOD1-202ENST00000411552 H2BFSP57053 126 aa12.07□□□□□ -0.48
NOD1-202ENST00000411552 DEFB131AP59861 70 aa12.07□□□□□ -0.48
NOD1-202ENST00000411552 SLC38A11Q08AI6 406 aa12.07□□□□□ -0.48
NOD1-202ENST00000411552 PPP1R14BQ96C90 147 aa12.07□□□□□ -0.48
NOD1-202ENST00000411552 ZNF688P0C7X2 276 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 ORM2P19652 201 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 C1orf194Q5T5A4 169 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 LEMD1Q68G75 181 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 TEPPQ6URK8 271 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 TMEM217Q8N7C4 229 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 OR1B1Q8NGR6 318 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 NRN1Q9NPD7 142 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 SLC45A2Q9UMX9 530 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 AGRNO00468 2067 aa12.06□□□□□ -0.48
NOD1-202ENST00000411552 LINC00869P0C866 280 aa12.05□□□□□ -0.48
NOD1-202ENST00000411552 SULT1A1P50225 295 aa12.05□□□□□ -0.48
NOD1-202ENST00000411552 APOC4P55056 127 aa12.05□□□□□ -0.48
NOD1-202ENST00000411552 SELENOTP62341 195 aa12.05□□□□□ -0.48
NOD1-202ENST00000411552 CYCSP99999 105 aaKnown RBP12.05□□□□□ -0.48
NOD1-202ENST00000411552 LRRC37A5PQ49AS3 106 aa12.05□□□□□ -0.48
NOD1-202ENST00000411552 TMEM252Q8N6L7 170 aa12.05□□□□□ -0.48
NOD1-202ENST00000411552 TMEM147Q9BVK8 224 aa12.05□□□□□ -0.48
NOD1-202ENST00000411552 FBXL17Q9UF56 701 aa12.05□□□□□ -0.48
NOD1-202ENST00000411552 KIR2DL5BA0A0G2JN68 375 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 KIR2DL5BA0A0G2JPC4 375 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 STX12Q86Y82 276 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 OR8I2Q8N0Y5 310 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 KIR2DL5AQ8N109 375 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 KIR2DL5BQ8NHK3 375 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 OR5AC2Q9NZP5 309 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 DOK5Q9P104 306 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 ALG5Q9Y673 324 aa12.04□□□□□ -0.48
NOD1-202ENST00000411552 ZNF98A6NK75 572 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 H0YIZ8 118 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 AGPAT2O15120 278 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 RLN2P04090 185 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 PLP1P60201 277 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 ZNF546Q86UE3 836 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 PPP1R1CQ8WVI7 109 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 MGST2Q99735 147 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 SLC25A22Q9H936 323 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 UQCC1Q9NVA1 299 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 HIGD1AQ9Y241 93 aa12.03□□□□□ -0.48
NOD1-202ENST00000411552 E5RGE8 158 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 UBE2CO00762 179 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 HYPMO75409 117 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 S100A11P31949 105 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 HBG1P69891 147 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 HBG2P69892 147 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 VWC2Q2TAL6 325 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 PSMG4Q5JS54 123 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 Q6ZWC4 215 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 OVOL2Q9BRP0 275 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 SCRT1Q9BWW7 348 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 SLC25A39Q9BZJ4 359 aaPredicted RBP12.02□□□□□ -0.49
NOD1-202ENST00000411552 ARL6Q9H0F7 186 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 SLC25A32Q9H2D1 315 aa12.02□□□□□ -0.49
NOD1-202ENST00000411552 UBE2L5PA0A1B0GUS4 154 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 KNCNA6PVL3 124 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 H3BRN7 92 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 OR5G3P0C626 314 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 S100A7P31151 101 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 RAP2BP61225 183 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 SNRPD3P62318 126 aaKnown RBP12.01□□□□□ -0.49
NOD1-202ENST00000411552 DEFB135Q30KP9 77 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 UHRF2Q96PU4 802 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 SHANK2-AS3Q9BTD1 123 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 CSTL1Q9H114 145 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 SEPSECSQ9HD40 501 aaKnown RBP12.01□□□□□ -0.49
NOD1-202ENST00000411552 WDR83OSQ9Y284 106 aa12.01□□□□□ -0.49
NOD1-202ENST00000411552 SOCS3O14543 225 aa12□□□□□ -0.49
NOD1-202ENST00000411552 MPC2O95563 127 aa12□□□□□ -0.49
NOD1-202ENST00000411552 GALR1P47211 349 aa12□□□□□ -0.49
NOD1-202ENST00000411552 CAMLGP49069 296 aa12□□□□□ -0.49
NOD1-202ENST00000411552 EWSR1Q01844 656 aaKnown RBP eCLIP12□□□□□ -0.49
NOD1-202ENST00000411552 NHLH2Q02577 135 aa12□□□□□ -0.49
NOD1-202ENST00000411552 PATE2Q6UY27 113 aa12□□□□□ -0.49
NOD1-202ENST00000411552 STHQ8IWL8 128 aa12□□□□□ -0.49
NOD1-202ENST00000411552 RNF126Q9BV68 326 aa12□□□□□ -0.49
NOD1-202ENST00000411552 SLC25A31Q9H0C2 315 aa12□□□□□ -0.49
NOD1-202ENST00000411552 SPRY2O43597 315 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 CXCL3P19876 107 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 BAXQ07812 192 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 RAB31Q13636 194 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 ATP6V1FQ16864 119 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 ACTL10Q5JWF8 245 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 PXDC1Q5TGL8 231 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 TRPT1Q86TN4 253 aaKnown RBP11.99□□□□□ -0.49
NOD1-202ENST00000411552 C17orf77Q96MU5 243 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 GPR82Q96P67 336 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 RSG1Q9BU20 258 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 TP53TG1Q9Y2A0 90 aa11.99□□□□□ -0.49
NOD1-202ENST00000411552 PET100P0DJ07 73 aa11.98□□□□□ -0.49
NOD1-202ENST00000411552 FGF7P21781 194 aa11.98□□□□□ -0.49
NOD1-202ENST00000411552 ID1P41134 155 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms