RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 C16orf54Q6UWD8 224 aa13.64□□□□□ -0.23
PAX3-208ENST00000409828 INO80EQ8NBZ0 244 aaPredicted RBP13.64□□□□□ -0.23
PAX3-208ENST00000409828 PBDC1Q9BVG4 233 aa13.64□□□□□ -0.23
PAX3-208ENST00000409828 GGTLC1Q9BX51 225 aa13.64□□□□□ -0.23
PAX3-208ENST00000409828 TNFSF18Q9UNG2 199 aa13.64□□□□□ -0.23
PAX3-208ENST00000409828 IGHV3-49A0A0A0MS15 119 aa13.63□□□□□ -0.23
PAX3-208ENST00000409828 HYPMO75409 117 aa13.63□□□□□ -0.23
PAX3-208ENST00000409828 CLINT1Q14677 625 aa13.63□□□□□ -0.23
PAX3-208ENST00000409828 GLMPQ8WWB7 406 aa13.63□□□□□ -0.23
PAX3-208ENST00000409828 WDR61Q9GZS3 305 aaKnown RBP13.63□□□□□ -0.23
PAX3-208ENST00000409828 KCNIP2Q9NS61 270 aa13.63□□□□□ -0.23
PAX3-208ENST00000409828 FBXL17Q9UF56 701 aa13.63□□□□□ -0.23
PAX3-208ENST00000409828 ELOA3CA0A087WX78 387 aaPredicted RBP13.62□□□□□ -0.23
PAX3-208ENST00000409828 FGF7P21781 194 aa13.62□□□□□ -0.23
PAX3-208ENST00000409828 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
PAX3-208ENST00000409828 Q6ZRG5 221 aa13.62□□□□□ -0.23
PAX3-208ENST00000409828 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
PAX3-208ENST00000409828 GTSCR1Q86UQ5 136 aa13.62□□□□□ -0.23
PAX3-208ENST00000409828 FAM110AQ9BQ89 295 aa13.62□□□□□ -0.23
PAX3-208ENST00000409828 NPCDR1Q9BY65 106 aa13.62□□□□□ -0.23
PAX3-208ENST00000409828 IGHV3OR16-13A0A075B7E8 117 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 FXYD6-FXYD2A0A087WZ82 144 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 IGHV3-74A0A0B4J1X5 117 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 OR4C46A6NHA9 309 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 HMSDA8MTL9 139 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 IFNA5P01569 189 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 ORM2P19652 201 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 ZNF266Q14584 549 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 GUCA2BQ16661 112 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 STPG3Q8N7X2 389 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 OR1B1Q8NGR6 318 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 PRR25Q96S07 402 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 HIGD1AQ9Y241 93 aa13.61□□□□□ -0.23
PAX3-208ENST00000409828 RNF222A6NCQ9 220 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 K7EIL1 84 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 CMC4P56277 68 aaPredicted RBP13.6□□□□□ -0.23
PAX3-208ENST00000409828 Q8N1Y9 231 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 ZNF709Q8N972 641 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 OR1L4Q8NGR5 311 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 GPR82Q96P67 336 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 PFDN5Q99471 154 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 ARL6Q9H0F7 186 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 SLC39A9Q9NUM3 307 aa13.6□□□□□ -0.23
PAX3-208ENST00000409828 IGHV3-66A0A0C4DH42 116 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 ZNF98A6NK75 572 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 C17orf112F2Z3M2 114 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 B2MP61769 119 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 MIC13Q5XKP0 118 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 TCTE3Q8IZS6 198 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 SCGB1C1Q8TD33 95 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 PPP1R14BQ96C90 147 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 ST6GAL2Q96JF0 529 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 SHANK2-AS3Q9BTD1 123 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 SLC25A39Q9BZJ4 359 aaPredicted RBP13.59□□□□□ -0.23
PAX3-208ENST00000409828 ARV1Q9H2C2 271 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 SEPSECSQ9HD40 501 aaKnown RBP13.59□□□□□ -0.23
PAX3-208ENST00000409828 PXMP4Q9Y6I8 212 aa13.59□□□□□ -0.23
PAX3-208ENST00000409828 A8MZ25 164 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 H3BRN7 92 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 PRB2P02812 416 aaPredicted RBP13.58□□□□□ -0.24
PAX3-208ENST00000409828 OR5G3P0C626 314 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 ZNF345Q14585 488 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 PATE2Q6UY27 113 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 SIGLEC15Q6ZMC9 328 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 GATAD1Q8WUU5 269 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 SMIM3Q9BZL3 60 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 WFDC1Q9HC57 220 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 DNAJC4Q9NNZ3 241 aa13.58□□□□□ -0.24
PAX3-208ENST00000409828 TAAR5O14804 337 aa13.57□□□□□ -0.24
PAX3-208ENST00000409828 SAMD13Q5VXD3 122 aa13.57□□□□□ -0.24
PAX3-208ENST00000409828 OR8I2Q8N0Y5 310 aa13.57□□□□□ -0.24
PAX3-208ENST00000409828 TMEM37Q8WXS4 190 aa13.57□□□□□ -0.24
PAX3-208ENST00000409828 MS4A6AQ9H2W1 248 aa13.57□□□□□ -0.24
PAX3-208ENST00000409828 TIMM9Q9Y5J7 89 aa13.57□□□□□ -0.24
PAX3-208ENST00000409828 SMAD5-AS1Q9Y6J3 95 aa13.57□□□□□ -0.24
PAX3-208ENST00000409828 ARPC5O15511 151 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 COX7A2P2O60397 106 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 RPL7P18124 248 aaKnown RBP13.56□□□□□ -0.24
PAX3-208ENST00000409828 CD81P60033 236 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 RPL11P62913 178 aaKnown RBP13.56□□□□□ -0.24
PAX3-208ENST00000409828 C10orf113Q5VZT2 155 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 MRAPQ8TCY5 172 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 MFFQ9GZY8 342 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 NRN1Q9NPD7 142 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 C19orf73Q9NVV2 129 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 DOK5Q9P104 306 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 SELENOKQ9Y6D0 94 aa13.56□□□□□ -0.24
PAX3-208ENST00000409828 K7EQG2 157 aa13.55□□□□□ -0.24
PAX3-208ENST00000409828 DNASE2O00115 360 aaPredicted RBP13.55□□□□□ -0.24
PAX3-208ENST00000409828 CD7P09564 240 aa13.55□□□□□ -0.24
PAX3-208ENST00000409828 GALR1P47211 349 aa13.55□□□□□ -0.24
PAX3-208ENST00000409828 LINC00305Q7Z4B0 112 aa13.55□□□□□ -0.24
PAX3-208ENST00000409828 OR11H4Q8NGC9 324 aa13.55□□□□□ -0.24
PAX3-208ENST00000409828 DCANP1Q8TF63 244 aa13.55□□□□□ -0.24
PAX3-208ENST00000409828 SMLR1H3BR10 107 aa13.54□□□□□ -0.24
PAX3-208ENST00000409828 MEOX2P50222 304 aa13.54□□□□□ -0.24
PAX3-208ENST00000409828 AKAP14Q86UN6 197 aa13.54□□□□□ -0.24
PAX3-208ENST00000409828 KCNRGQ8N5I3 272 aa13.54□□□□□ -0.24
PAX3-208ENST00000409828 UHRF2Q96PU4 802 aa13.54□□□□□ -0.24
PAX3-208ENST00000409828 PSMG3Q9BT73 122 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms