RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 UNQ9165/PRO28630Q6UXU0 137 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 C8orf86Q6ZUL3 223 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 MIR17HGQ75NE6 70 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 MRPL27Q9P0M9 148 aaKnown RBP12.92□□□□□ -0.34
SSB-202ENST00000409333 HIGD1AQ9Y241 93 aa12.92□□□□□ -0.34
SSB-202ENST00000409333 TSSC4Q9Y5U2 329 aaPredicted RBP12.92□□□□□ -0.34
SSB-202ENST00000409333 ELOA3CA0A087WX78 387 aaPredicted RBP12.91□□□□□ -0.34
SSB-202ENST00000409333 A0A1W2PPV4 95 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 NDUFA4O00483 81 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 HSPB1P04792 205 aaKnown RBP12.91□□□□□ -0.34
SSB-202ENST00000409333 H2AFB1P0C5Y9 115 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 BLOC1S1P78537 153 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 AWAT1Q58HT5 328 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 LCN15Q6UWW0 184 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 C19orf24Q9BVV8 132 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 FUT9Q9Y231 359 aa12.91□□□□□ -0.34
SSB-202ENST00000409333 MAP1LC3B2A6NCE7 125 aa12.9□□□□□ -0.34
SSB-202ENST00000409333 FGF8P55075 233 aaPredicted RBP12.9□□□□□ -0.34
SSB-202ENST00000409333 RPEL1Q2QD12 228 aa12.9□□□□□ -0.34
SSB-202ENST00000409333 OR11H1Q8NG94 326 aa12.9□□□□□ -0.34
SSB-202ENST00000409333 SFT2D1Q8WV19 159 aa12.9□□□□□ -0.34
SSB-202ENST00000409333 C20orf24Q9BUV8 137 aa12.9□□□□□ -0.34
SSB-202ENST00000409333 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.34
SSB-202ENST00000409333 TRAV5A0A0B4J249 113 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 TEX46H3BTG2 121 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 ZNF207O43670 478 aaKnown RBP12.89□□□□□ -0.35
SSB-202ENST00000409333 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
SSB-202ENST00000409333 LEMD1Q68G75 181 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 MBD3L1Q8WWY6 194 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 SCRT1Q9BWW7 348 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 MRPL32Q9BYC8 188 aaKnown RBP12.89□□□□□ -0.35
SSB-202ENST00000409333 SLC25A39Q9BZJ4 359 aaPredicted RBP12.89□□□□□ -0.35
SSB-202ENST00000409333 HRH4Q9H3N8 390 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 ADARB2-AS1A8MUL3 147 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 TMEM190Q8WZ59 177 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 RNF2Q99496 336 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
SSB-202ENST00000409333 ZNF320A2RRD8 509 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 LINC01619G3V211 115 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 H3BRN7 92 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 STAG3L2P0CL84 134 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 STAG3L3P0CL85 134 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 SLURP1P55000 103 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 GPHB5Q86YW7 130 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 OR1N2Q8NGR9 330 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 LYPD6BQ8NI32 183 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 SLC25A2Q9BXI2 301 aa12.88□□□□□ -0.35
SSB-202ENST00000409333 FBN1P35555 2871 aaKnown RBP12.88□□□□□ -0.35
SSB-202ENST00000409333 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
SSB-202ENST00000409333 RAX2Q96IS3 184 aa12.87□□□□□ -0.35
SSB-202ENST00000409333 FAM167A-AS1Q96KT0 104 aa12.87□□□□□ -0.35
SSB-202ENST00000409333 SHANK2-AS3Q9BTD1 123 aa12.87□□□□□ -0.35
SSB-202ENST00000409333 C8orf88P0DMB2 117 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 CCL20P78556 96 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 NSUN5P1Q3KNT7 163 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 FAM106AQ4KMX7 169 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 DPF1Q92782 380 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 TECRQ9NZ01 308 aaKnown RBP12.86□□□□□ -0.35
SSB-202ENST00000409333 IGHV3OR16-13A0A075B7E8 117 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 IGHV3-49A0A0A0MS15 119 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 IGHV3-74A0A0B4J1X5 117 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 ZNF98A6NK75 572 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 APOHP02749 345 aaPredicted RBP12.86□□□□□ -0.35
SSB-202ENST00000409333 EDN2P20800 178 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 ZP3P21754 424 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 SYNJ2BPP57105 145 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 ZNF503Q96F45 646 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 METTL26Q96S19 204 aa12.86□□□□□ -0.35
SSB-202ENST00000409333 TRAV1-1A0A0B4J248 108 aa12.85□□□□□ -0.35
SSB-202ENST00000409333 CRYBB3P26998 211 aa12.85□□□□□ -0.35
SSB-202ENST00000409333 KHDC3LQ587J8 217 aa12.85□□□□□ -0.35
SSB-202ENST00000409333 IQCF2Q8IXL9 164 aa12.85□□□□□ -0.35
SSB-202ENST00000409333 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 OR7C2O60412 319 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 HBE1P02100 147 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 PYYP10082 97 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 NPPCP23582 126 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 TAS2R45P59539 299 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 FHL3Q13643 280 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 KLF5Q13887 457 aaPredicted RBP12.84□□□□□ -0.35
SSB-202ENST00000409333 REC114Q7Z4M0 266 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 NDUFA11Q86Y39 141 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 C1QL4Q86Z23 238 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
SSB-202ENST00000409333 CCL24O00175 119 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 CXorf1O96002 111 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 OR10J4P0C629 311 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 CITED1Q99966 193 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 U3KQE9 123 aa12.84□□□□□ -0.35
SSB-202ENST00000409333 LGALS9O00182 355 aa12.83□□□□□ -0.36
SSB-202ENST00000409333 BUB3O43684 328 aa12.83□□□□□ -0.36
SSB-202ENST00000409333 GP9P14770 177 aa12.83□□□□□ -0.36
SSB-202ENST00000409333 IL34Q6ZMJ4 242 aa12.83□□□□□ -0.36
SSB-202ENST00000409333 TMEM213A2RRL7 107 aa12.82□□□□□ -0.36
SSB-202ENST00000409333 A8MWP6 167 aa12.82□□□□□ -0.36
SSB-202ENST00000409333 SNRPCP09234 159 aaKnown RBP12.82□□□□□ -0.36
SSB-202ENST00000409333 GCHFRP30047 84 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms