RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 RPL29P47914 159 aaKnown RBP13.25□□□□□ -0.29
CTNS-203ENST00000399306 CAMLGP49069 296 aa13.25□□□□□ -0.29
CTNS-203ENST00000399306 GUCA2BQ16661 112 aa13.25□□□□□ -0.29
CTNS-203ENST00000399306 TMEM182Q6ZP80 229 aaPredicted RBP13.25□□□□□ -0.29
CTNS-203ENST00000399306 OR2T35Q8NGX2 323 aa13.25□□□□□ -0.29
CTNS-203ENST00000399306 ATP5SQ99766 215 aa13.25□□□□□ -0.29
CTNS-203ENST00000399306 PARD6GQ9BYG4 376 aaPredicted RBP13.25□□□□□ -0.29
CTNS-203ENST00000399306 SMAD5-AS1Q9Y6J3 95 aa13.25□□□□□ -0.29
CTNS-203ENST00000399306 ELOA3CA0A087WX78 387 aaPredicted RBP13.24□□□□□ -0.29
CTNS-203ENST00000399306 IGHV3-49A0A0A0MS15 119 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 HYPMO75409 117 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 PRR20EP86478 221 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 PRR20CP86479 221 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 PRR20DP86480 221 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 PRR20BP86481 221 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 PRR20AP86496 221 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 GPR82Q96P67 336 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 NEURL2Q9BR09 285 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 GGTLC1Q9BX51 225 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 SEPSECSQ9HD40 501 aaKnown RBP13.24□□□□□ -0.29
CTNS-203ENST00000399306 KCNIP2Q9NS61 270 aa13.24□□□□□ -0.29
CTNS-203ENST00000399306 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
CTNS-203ENST00000399306 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
CTNS-203ENST00000399306 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
CTNS-203ENST00000399306 GATA2P23769 480 aaPredicted RBP13.23□□□□□ -0.29
CTNS-203ENST00000399306 OPCMLQ14982 345 aa13.23□□□□□ -0.29
CTNS-203ENST00000399306 ORM2P19652 201 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 FGF7P21781 194 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 CD81P60033 236 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 SAMD13Q5VXD3 122 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 Q6ZRG5 221 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 STPG3Q8N7X2 389 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 OR1B1Q8NGR6 318 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 NPCDR1Q9BY65 106 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 WDR61Q9GZS3 305 aaKnown RBP13.22□□□□□ -0.29
CTNS-203ENST00000399306 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
CTNS-203ENST00000399306 ZNF98A6NK75 572 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 G3V3Q6 166 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 IFNA5P01569 189 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 CLINT1Q14677 625 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 INO80EQ8NBZ0 244 aaPredicted RBP13.21□□□□□ -0.29
CTNS-203ENST00000399306 OR1L4Q8NGR5 311 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 PPP1R14BQ96C90 147 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 PFDN5Q99471 154 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 SHANK2-AS3Q9BTD1 123 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 ARL6Q9H0F7 186 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 MS4A6AQ9H2W1 248 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 C19orf73Q9NVV2 129 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 TNFSF18Q9UNG2 199 aa13.21□□□□□ -0.29
CTNS-203ENST00000399306 IGHV3-66A0A0C4DH42 116 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 C17orf112F2Z3M2 114 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 H3BRN7 92 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 DNASE2O00115 360 aaPredicted RBP13.2□□□□□ -0.3
CTNS-203ENST00000399306 CD7P09564 240 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 B2MP61769 119 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 ZNF266Q14584 549 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 Q5BKY6 102 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 SLC25A39Q9BZJ4 359 aaPredicted RBP13.2□□□□□ -0.3
CTNS-203ENST00000399306 ARV1Q9H2C2 271 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 SLC39A9Q9NUM3 307 aa13.2□□□□□ -0.3
CTNS-203ENST00000399306 K7EQG2 157 aa13.19□□□□□ -0.3
CTNS-203ENST00000399306 RPL11P62913 178 aaKnown RBP13.19□□□□□ -0.3
CTNS-203ENST00000399306 DEFB121Q5J5C9 76 aa13.19□□□□□ -0.3
CTNS-203ENST00000399306 OR8I2Q8N0Y5 310 aa13.19□□□□□ -0.3
CTNS-203ENST00000399306 ZNF709Q8N972 641 aa13.19□□□□□ -0.3
CTNS-203ENST00000399306 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
CTNS-203ENST00000399306 B9D2Q9BPU9 175 aa13.19□□□□□ -0.3
CTNS-203ENST00000399306 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
CTNS-203ENST00000399306 NRN1Q9NPD7 142 aa13.19□□□□□ -0.3
CTNS-203ENST00000399306 OR11H12B2RN74 326 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 OR5G3P0C626 314 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 IGHV4-30-4P0DP06 118 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
CTNS-203ENST00000399306 GALR1P47211 349 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 MEOX2P50222 304 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 MIC13Q5XKP0 118 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 PATE2Q6UY27 113 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 DCANP1Q8TF63 244 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 PXMP4Q9Y6I8 212 aa13.18□□□□□ -0.3
CTNS-203ENST00000399306 FXYD6-FXYD2A0A087WZ82 144 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 RNF222A6NCQ9 220 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 HMSDA8MTL9 139 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 COX7A2P2O60397 106 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 ODF3L2Q3SX64 289 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 C10orf113Q5VZT2 155 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 TMEM37Q8WXS4 190 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
CTNS-203ENST00000399306 LINC00305Q7Z4B0 112 aa13.16□□□□□ -0.3
CTNS-203ENST00000399306 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
CTNS-203ENST00000399306 DOK5Q9P104 306 aa13.16□□□□□ -0.3
CTNS-203ENST00000399306 IGKV3-7A0A075B6H7 116 aa13.15□□□□□ -0.3
CTNS-203ENST00000399306 TAAR5O14804 337 aa13.15□□□□□ -0.3
CTNS-203ENST00000399306 ZNF345Q14585 488 aa13.15□□□□□ -0.3
CTNS-203ENST00000399306 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
CTNS-203ENST00000399306 TCTE3Q8IZS6 198 aa13.15□□□□□ -0.3
CTNS-203ENST00000399306 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms