RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ZNF575Q86XF7 245 aa16.43■□□□□ 0.22
U2AF1-202ENST00000380276 CLVS1Q8IUQ0 354 aaPredicted RBP16.43■□□□□ 0.22
U2AF1-202ENST00000380276 OR1S1Q8NH92 325 aa16.43■□□□□ 0.22
U2AF1-202ENST00000380276 TMEM208Q9BTX3 173 aa16.43■□□□□ 0.22
U2AF1-202ENST00000380276 HSPB7Q9UBY9 170 aa16.43■□□□□ 0.22
U2AF1-202ENST00000380276 RYR1P21817 5038 aa16.42■□□□□ 0.22
U2AF1-202ENST00000380276 AKR1C4P17516 323 aa16.42■□□□□ 0.22
U2AF1-202ENST00000380276 GAMTQ14353 236 aa16.42■□□□□ 0.22
U2AF1-202ENST00000380276 SPATA31B1PQ5VZV4 182 aa16.42■□□□□ 0.22
U2AF1-202ENST00000380276 TMEM88Q6PEY1 159 aa16.42■□□□□ 0.22
U2AF1-202ENST00000380276 SMIM4Q8WVI0 70 aa16.42■□□□□ 0.22
U2AF1-202ENST00000380276 TMED3Q9Y3Q3 217 aa16.42■□□□□ 0.22
U2AF1-202ENST00000380276 DNAH11Q96DT5 4516 aa16.42■□□□□ 0.22
U2AF1-202ENST00000380276 SNRPGP15A8MWD9 76 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 SOCS3O14543 225 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 ZNF79Q15937 498 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 C1orf194Q5T5A4 169 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 C1orf134Q5TEV5 83 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 Q6ZR54 194 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 LYZL2Q7Z4W2 148 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 C1orf158Q8N1D5 194 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 C16orf92Q96LL3 132 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 RPRMQ9NS64 109 aa16.41■□□□□ 0.22
U2AF1-202ENST00000380276 IGKV1D-37A0A075B6S9 117 aa16.4■□□□□ 0.22
U2AF1-202ENST00000380276 ISLRO14498 428 aa16.4■□□□□ 0.22
U2AF1-202ENST00000380276 CTDSP2O14595 271 aa16.4■□□□□ 0.22
U2AF1-202ENST00000380276 GPX4P36969 197 aaPredicted RBP16.4■□□□□ 0.22
U2AF1-202ENST00000380276 RNF212Q495C1 297 aa16.4■□□□□ 0.22
U2AF1-202ENST00000380276 CLUHP3Q96NS8 147 aa16.4■□□□□ 0.22
U2AF1-202ENST00000380276 MCUBQ9NWR8 336 aa16.4■□□□□ 0.22
U2AF1-202ENST00000380276 SCP2D1Q9UJQ7 156 aa16.4■□□□□ 0.22
U2AF1-202ENST00000380276 A0A0B4J2A0 478 aa16.39■□□□□ 0.21
U2AF1-202ENST00000380276 SCGB3A2Q96PL1 93 aa16.39■□□□□ 0.21
U2AF1-202ENST00000380276 ATG101Q9BSB4 218 aa16.39■□□□□ 0.21
U2AF1-202ENST00000380276 SLC25A22Q9H936 323 aa16.39■□□□□ 0.21
U2AF1-202ENST00000380276 SHPKQ9UHJ6 478 aa16.39■□□□□ 0.21
U2AF1-202ENST00000380276 A0A0J9YX75 114 aa16.38■□□□□ 0.21
U2AF1-202ENST00000380276 IAPPP10997 89 aa16.38■□□□□ 0.21
U2AF1-202ENST00000380276 ANXA3P12429 323 aa16.38■□□□□ 0.21
U2AF1-202ENST00000380276 PAX9P55771 341 aa16.38■□□□□ 0.21
U2AF1-202ENST00000380276 RAB11AP62491 216 aa16.38■□□□□ 0.21
U2AF1-202ENST00000380276 OXA1LQ15070 435 aa16.38■□□□□ 0.21
U2AF1-202ENST00000380276 DIRAS2Q96HU8 199 aa16.38■□□□□ 0.21
U2AF1-202ENST00000380276 DOK5Q9P104 306 aa16.38■□□□□ 0.21
U2AF1-202ENST00000380276 PKD1P98161 4303 aa16.37■□□□□ 0.21
U2AF1-202ENST00000380276 GALR1P47211 349 aa16.37■□□□□ 0.21
U2AF1-202ENST00000380276 SAMD13Q5VXD3 122 aa16.37■□□□□ 0.21
U2AF1-202ENST00000380276 C20orf173Q96LM9 149 aa16.37■□□□□ 0.21
U2AF1-202ENST00000380276 MEOX2P50222 304 aa16.36■□□□□ 0.21
U2AF1-202ENST00000380276 ATP5IP56385 69 aaPredicted RBP16.36■□□□□ 0.21
U2AF1-202ENST00000380276 SRPXP78539 464 aa16.36■□□□□ 0.21
U2AF1-202ENST00000380276 TRGV9Q99603 122 aa16.36■□□□□ 0.21
U2AF1-202ENST00000380276 CTDSPLO15194 276 aa16.35■□□□□ 0.21
U2AF1-202ENST00000380276 IGF2BP2-AS1Q96M15 143 aa16.35■□□□□ 0.21
U2AF1-202ENST00000380276 RSG1Q9BU20 258 aa16.35■□□□□ 0.21
U2AF1-202ENST00000380276 SLC25A32Q9H2D1 315 aa16.35■□□□□ 0.21
U2AF1-202ENST00000380276 MUC4Q99102 2169 aa16.35■□□□□ 0.21
U2AF1-202ENST00000380276 ABCA13Q86UQ4 5058 aa16.34■□□□□ 0.21
U2AF1-202ENST00000380276 ANKRD20A5PA0PJZ0 165 aa16.34■□□□□ 0.21
U2AF1-202ENST00000380276 SMIM18P0DKX4 95 aa16.34■□□□□ 0.21
U2AF1-202ENST00000380276 C15orf53Q8NAA6 179 aa16.34■□□□□ 0.21
U2AF1-202ENST00000380276 ZNF705GA8MUZ8 300 aaPredicted RBP16.33■□□□□ 0.2
U2AF1-202ENST00000380276 FGL1Q08830 312 aa16.33■□□□□ 0.2
U2AF1-202ENST00000380276 SPCS2Q15005 226 aa16.33■□□□□ 0.2
U2AF1-202ENST00000380276 SPINK13Q1W4C9 94 aa16.33■□□□□ 0.2
U2AF1-202ENST00000380276 NACAE9PAV3 2078 aa16.33■□□□□ 0.2
U2AF1-202ENST00000380276 M0R2Z0 102 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 INSP01308 110 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 PRM2P04554 102 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 DEFB130BP0DP73 79 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 DEFB130AP0DP74 79 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 ORM2P19652 201 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 GGNBP1Q5YKI7 109 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 GPR141Q7Z602 305 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 TMED4Q7Z7H5 227 aa16.32■□□□□ 0.2
U2AF1-202ENST00000380276 IGKV1OR2-108A0A075B7D4 117 aa16.31■□□□□ 0.2
U2AF1-202ENST00000380276 ZNF98A6NK75 572 aa16.31■□□□□ 0.2
U2AF1-202ENST00000380276 DUSP14O95147 198 aaKnown RBP16.31■□□□□ 0.2
U2AF1-202ENST00000380276 CFDP00746 253 aaPredicted RBP16.31■□□□□ 0.2
U2AF1-202ENST00000380276 CNN1P51911 297 aaKnown RBP16.31■□□□□ 0.2
U2AF1-202ENST00000380276 IGFL4Q6B9Z1 124 aa16.31■□□□□ 0.2
U2AF1-202ENST00000380276 THAP8Q8NA92 274 aa16.31■□□□□ 0.2
U2AF1-202ENST00000380276 RABL2AQ9UBK7 228 aaPredicted RBP16.31■□□□□ 0.2
U2AF1-202ENST00000380276 RABL2BQ9UNT1 228 aa16.31■□□□□ 0.2
U2AF1-202ENST00000380276 C16orf90A8MZG2 172 aa16.3■□□□□ 0.2
U2AF1-202ENST00000380276 F5H768 121 aa16.3■□□□□ 0.2
U2AF1-202ENST00000380276 NUDT3O95989 172 aa16.3■□□□□ 0.2
U2AF1-202ENST00000380276 AMTNQ6UX39 209 aa16.3■□□□□ 0.2
U2AF1-202ENST00000380276 BPIFCQ8NFQ6 507 aa16.3■□□□□ 0.2
U2AF1-202ENST00000380276 OR1B1Q8NGR6 318 aa16.3■□□□□ 0.2
U2AF1-202ENST00000380276 TMEM147Q9BVK8 224 aa16.3■□□□□ 0.2
U2AF1-202ENST00000380276 KRTAP4-5Q9BYR2 181 aa16.3■□□□□ 0.2
U2AF1-202ENST00000380276 RSL24D1Q9UHA3 163 aaKnown RBP16.3■□□□□ 0.2
U2AF1-202ENST00000380276 PIGBOS1A0A0B4J2F0 54 aa16.29■□□□□ 0.2
U2AF1-202ENST00000380276 VAMP1P23763 118 aa16.29■□□□□ 0.2
U2AF1-202ENST00000380276 GATA2P23769 480 aaPredicted RBP16.29■□□□□ 0.2
U2AF1-202ENST00000380276 FAM3BP58499 235 aaPredicted RBP16.29■□□□□ 0.2
U2AF1-202ENST00000380276 RPP30P78346 268 aaKnown RBP16.29■□□□□ 0.2
U2AF1-202ENST00000380276 AKR1C1Q04828 323 aa16.29■□□□□ 0.2
U2AF1-202ENST00000380276 TNP2Q05952 138 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms