RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 PRR20CP86479 221 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 PRR20DP86480 221 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 PRR20BP86481 221 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 PRR20AP86496 221 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 TMEM182Q6ZP80 229 aaPredicted RBP10.02□□□□□ -0.81
TIMP1-202ENST00000377017 HSD17B11Q8NBQ5 300 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 PFDN5Q99471 154 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 RSG1Q9BU20 258 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 ZNF471Q9BX82 626 aaPredicted RBP10.02□□□□□ -0.81
TIMP1-202ENST00000377017 TECRQ9NZ01 308 aaKnown RBP10.02□□□□□ -0.81
TIMP1-202ENST00000377017 SMPXQ9UHP9 88 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 HIGD1AQ9Y241 93 aa10.02□□□□□ -0.81
TIMP1-202ENST00000377017 C8orf88P0DMB2 117 aa10.01□□□□□ -0.81
TIMP1-202ENST00000377017 LGALSLQ3ZCW2 172 aaPredicted RBP10.01□□□□□ -0.81
TIMP1-202ENST00000377017 PSMG3Q9BT73 122 aaPredicted RBP10.01□□□□□ -0.81
TIMP1-202ENST00000377017 DOK5Q9P104 306 aa10.01□□□□□ -0.81
TIMP1-202ENST00000377017 CD5P06127 495 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 TPT1P13693 172 aaKnown RBP10□□□□□ -0.81
TIMP1-202ENST00000377017 IGLL1P15814 213 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 ATP6V0CP27449 155 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 SERF2P84101 59 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 FFAR4Q5NUL3 377 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 C10orf113Q5VZT2 155 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 IL34Q6ZMJ4 242 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 C9orf62Q8N4C0 152 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 OR2K2Q8NGT1 345 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 GATAD1Q8WUU5 269 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 RHPN1-AS1Q9BWJ2 59 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 ARV1Q9H2C2 271 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 DNAJC4Q9NNZ3 241 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 CYTL1Q9NRR1 136 aa10□□□□□ -0.81
TIMP1-202ENST00000377017 IGHV3-49A0A0A0MS15 119 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 CHEK1O14757 476 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 MBP02144 154 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 ACOT6Q3I5F7 207 aaPredicted RBP9.99□□□□□ -0.81
TIMP1-202ENST00000377017 C1orf194Q5T5A4 169 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 LAMTOR1Q6IAA8 161 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 OR2G3Q8NGZ4 309 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 ST8SIA2Q92186 375 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 RNF2Q99496 336 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 VSIRQ9H7M9 311 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 ZMAT5Q9UDW3 170 aaKnown RBP9.99□□□□□ -0.81
TIMP1-202ENST00000377017 U3KQE9 123 aa9.99□□□□□ -0.81
TIMP1-202ENST00000377017 IGHV3OR16-13A0A075B7E8 117 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 IGHV3-74A0A0B4J1X5 117 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 H3BRN7 92 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 LCN12Q6JVE5 192 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 RBPMS2Q6ZRY4 209 aaKnown RBP9.98□□□□□ -0.81
TIMP1-202ENST00000377017 LINC00305Q7Z4B0 112 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 SLC51BQ86UW2 128 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 STOML3Q8TAV4 291 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 SHANK2-AS3Q9BTD1 123 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 SLC25A39Q9BZJ4 359 aaPredicted RBP9.98□□□□□ -0.81
TIMP1-202ENST00000377017 SLC25A32Q9H2D1 315 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 MLXQ9UH92 298 aa9.98□□□□□ -0.81
TIMP1-202ENST00000377017 TRAV25A0A0B4J276 109 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 IGHV3-66A0A0C4DH42 116 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 HELTA6NFD8 242 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 ZNF98A6NK75 572 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 WIPF1O43516 503 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 BUB3O43684 328 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 IGLV1-51P01701 117 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 APOHP02749 345 aaPredicted RBP9.97□□□□□ -0.81
TIMP1-202ENST00000377017 M6PRP20645 277 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 EDN2P20800 178 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 NKX2-5P52952 324 aaPredicted RBP9.97□□□□□ -0.81
TIMP1-202ENST00000377017 DEFB114Q30KQ6 69 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 EIF5AL1Q6IS14 154 aaKnown RBP9.97□□□□□ -0.81
TIMP1-202ENST00000377017 C16orf54Q6UWD8 224 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 PATE2Q6UY27 113 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 ADAMTSL5Q6ZMM2 481 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 BAP18Q8IXM2 172 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 OR8I2Q8N0Y5 310 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 GPR82Q96P67 336 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 MRPL32Q9BYC8 188 aaKnown RBP9.97□□□□□ -0.81
TIMP1-202ENST00000377017 TRRAPQ9Y4A5 3859 aa9.97□□□□□ -0.81
TIMP1-202ENST00000377017 SEC11BP0C7V7 166 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 SPP1P10451 314 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 RHOBP62745 196 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 RPL11P62913 178 aaKnown RBP9.96□□□□□ -0.82
TIMP1-202ENST00000377017 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.82
TIMP1-202ENST00000377017 AKR1C8PQ5T2L2 129 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 FAM78BQ5VT40 261 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 TCF24Q7RTU0 167 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 GLMPQ8WWB7 406 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 UHRF2Q96PU4 802 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 SCRT1Q9BWW7 348 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 SH3BGRL3Q9H299 93 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 SLC25A22Q9H936 323 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 VWFP04275 2813 aa9.96□□□□□ -0.82
TIMP1-202ENST00000377017 A0A1W2PPV4 95 aa9.95□□□□□ -0.82
TIMP1-202ENST00000377017 RPL7P18124 248 aaKnown RBP9.95□□□□□ -0.82
TIMP1-202ENST00000377017 GALR1P47211 349 aa9.95□□□□□ -0.82
TIMP1-202ENST00000377017 PAFAH1B2P68402 229 aa9.95□□□□□ -0.82
TIMP1-202ENST00000377017 TMEM41BQ5BJD5 291 aa9.95□□□□□ -0.82
TIMP1-202ENST00000377017 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
TIMP1-202ENST00000377017 GCSAMLQ5JQS6 135 aa9.95□□□□□ -0.82
TIMP1-202ENST00000377017 SIGLEC15Q6ZMC9 328 aa9.95□□□□□ -0.82
TIMP1-202ENST00000377017 OR10G4Q8NGN3 311 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms