RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 MRPL36Q9P0J6 103 aaKnown RBP8.98□□□□□ -0.97
SSU72-202ENST00000359060 IGHV3-49A0A0A0MS15 119 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 M0R143 59 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 OR5R1Q8NH85 324 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 PRSS3P2Q8NHM4 247 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 C8orf46Q8TAG6 207 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 C11orf52Q96A22 123 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 TRGV9Q99603 122 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 AARDQ4LEZ3 155 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 C21orf62Q9NYP8 219 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 LY96Q9Y6Y9 160 aa8.98□□□□□ -0.97
SSU72-202ENST00000359060 IGKV3-7A0A075B6H7 116 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 MUC21A0A0G2JKD1 596 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 MUC21A0A140T8X8 626 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 A0A1B0GWJ7 208 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 C22orf46C9J442 243 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 MUC21Q5SSG8 566 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 FA2HQ7L5A8 372 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 RNF125Q96EQ8 232 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 GNB1LQ9BYB4 327 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 HIF1ANQ9NWT6 349 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 V9GYV3 84 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 TET2Q6N021 2002 aaPredicted RBP8.97□□□□□ -0.97
SSU72-202ENST00000359060 IGLC7A0M8Q6 106 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 OR2T8A6NH00 312 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 CX3CL1P78423 397 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 ZNF329Q86UD4 541 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 ZNF664Q8N3J9 261 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 Q8N7P7 452 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 SLC25A39Q9BZJ4 359 aaPredicted RBP8.97□□□□□ -0.97
SSU72-202ENST00000359060 ORM1P02763 201 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 HNRNPA3P51991 378 aaKnown RBP8.97□□□□□ -0.97
SSU72-202ENST00000359060 FAM162BQ5T6X4 162 aa8.97□□□□□ -0.97
SSU72-202ENST00000359060 RPP21Q9H633 154 aaKnown RBP8.97□□□□□ -0.97
SSU72-202ENST00000359060 LOC400499M0QZD8 3231 aa8.96□□□□□ -0.97
SSU72-202ENST00000359060 IGHV3-66A0A0C4DH42 116 aa8.96□□□□□ -0.97
SSU72-202ENST00000359060 CHODLQ9H9P2 273 aa8.96□□□□□ -0.97
SSU72-202ENST00000359060 CGB1A6NKQ9 187 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 NDUFS7O75251 213 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 HLA-DRB1P01911 266 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 FRMD6-AS1P0C7T7 363 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 HBBP68871 147 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 Q6ZN92 141 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 CIARTQ8N365 385 aaPredicted RBP8.96□□□□□ -0.98
SSU72-202ENST00000359060 KLHDC1Q8N7A1 406 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 NRN1Q9NPD7 142 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 FBXL7Q9UJT9 491 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 RIGQ13278 110 aa8.96□□□□□ -0.98
SSU72-202ENST00000359060 COL25A1Q9BXS0 654 aaPredicted RBP8.96□□□□□ -0.98
SSU72-202ENST00000359060 J3KRW8 73 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 GPR183P32249 361 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 PATE2Q6UY27 113 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.95□□□□□ -0.98
SSU72-202ENST00000359060 ZNF207O43670 478 aaKnown RBP8.95□□□□□ -0.98
SSU72-202ENST00000359060 VMO1Q7Z5L0 202 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 BEND2Q8NDZ0 799 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 TRAV30A0A087WSZ9 112 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 TCRAP04437 139 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 C5orf64Q2M2E5 130 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 NUP35Q8NFH5 326 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 FAM168AQ92567 244 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 FMC1Q96HJ9 113 aa8.95□□□□□ -0.98
SSU72-202ENST00000359060 M0R3E3 92 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 GOSR1O95249 250 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 RPL15P61313 204 aaKnown RBP8.94□□□□□ -0.98
SSU72-202ENST00000359060 PRDM13Q9H4Q3 707 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 LINC00574Q9H8X3 128 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 OTORQ9NRC9 128 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 LOC389332A0A1B0GUA5 103 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 NUPR1O60356 82 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 CLEC3BP05452 202 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 TSKUQ8WUA8 353 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 ZNF503Q96F45 646 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 SH2D7A6NKC9 451 aaPredicted RBP8.94□□□□□ -0.98
SSU72-202ENST00000359060 F2Z2F3 143 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 IGLV2-23P01705 113 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 RPL7P18124 248 aaKnown RBP8.94□□□□□ -0.98
SSU72-202ENST00000359060 SPATA45Q537H7 98 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 DMRTC2Q8IXT2 367 aaPredicted RBP8.94□□□□□ -0.98
SSU72-202ENST00000359060 ST6GALNAC6Q969X2 333 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 FXYD5Q96DB9 178 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 C1orf159Q96HA4 380 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 RABAC1Q9UI14 185 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 YPEL3P61236 119 aaPredicted RBP8.94□□□□□ -0.98
SSU72-202ENST00000359060 SP5Q6BEB4 398 aaPredicted RBP8.94□□□□□ -0.98
SSU72-202ENST00000359060 C14orf144Q96I85 54 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 FAM167A-AS1Q96KT0 104 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 NDUFAF3Q9BU61 184 aa8.94□□□□□ -0.98
SSU72-202ENST00000359060 SPENQ96T58 3664 aaKnown RBP8.93□□□□□ -0.98
SSU72-202ENST00000359060 TMEM189A5PLL7 270 aa8.93□□□□□ -0.98
SSU72-202ENST00000359060 LY6EQ16553 131 aa8.93□□□□□ -0.98
SSU72-202ENST00000359060 CYB5R2Q6BCY4 276 aa8.93□□□□□ -0.98
SSU72-202ENST00000359060 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
SSU72-202ENST00000359060 KCNS1Q96KK3 526 aa8.93□□□□□ -0.98
SSU72-202ENST00000359060 LINC00527Q9UJ94 153 aa8.93□□□□□ -0.98
SSU72-202ENST00000359060 BMPR1BO00238 502 aa8.93□□□□□ -0.98
SSU72-202ENST00000359060 NDUFS6O75380 124 aaKnown RBP8.93□□□□□ -0.98
SSU72-202ENST00000359060 PRTN3P24158 256 aa8.93□□□□□ -0.98
SSU72-202ENST00000359060 AKAP13Q12802 2813 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms