RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ITGBL1O95965 494 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-202ENST00000357162 USMG5Q96IX5 58 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 TRBV7-9A0A0J9YWB2 115 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 MYMXA0A1B0GTQ4 84 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV4-34P06331 123 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 RPL32P62910 135 aaKnown RBP5.47□□□□□ -1.53
VPS13B-202ENST00000357162 ATP6V0BQ99437 205 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 VKORC1Q9BQB6 163 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 UTP20O75691 2785 aaKnown RBP5.47□□□□□ -1.53
VPS13B-202ENST00000357162 IFITM1P13164 125 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 NUP37Q8NFH4 326 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 ADMP35318 185 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 GATA4P43694 442 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 PRSS12P56730 875 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 LENEPQ9Y5L5 61 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 IGLC2P0DOY2 106 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 IGLC3P0DOY3 106 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 ATP6V0E2Q8NHE4 81 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 IL9P15248 144 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 FOXA3P55318 350 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-202ENST00000357162 AMELYQ99218 206 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 SMAD7O15105 426 aaKnown RBP5.47□□□□□ -1.53
VPS13B-202ENST00000357162 NPFFO15130 113 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF56Q15929 161 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 SIGLEC12Q96PQ1 595 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 C9orf50Q5SZB4 431 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM75Q8N9X5 138 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 SNHG12Q9BXW3 62 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 TRAV8-1A0A0A6YYK1 113 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 TCRAP04437 139 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 CRYGSP22914 178 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 A0A1W2PQF6 199 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 PPP1R27Q86WC6 154 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 TPRX1Q8N7U7 411 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 CRISPLD2Q9H0B8 497 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV2-26A0A0B4J1V2 119 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM14BQ9NUH8 114 aa5.46□□□□□ -1.53
VPS13B-202ENST00000357162 SETXQ7Z333 2677 aaKnown RBP5.46□□□□□ -1.54
VPS13B-202ENST00000357162 TRAV5A0A0B4J249 113 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 TRAV24A0A0B4J272 114 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 FAM19A2Q8N3H0 131 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 H7C2G1 150 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 PYGO2Q9BRQ0 406 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 PFN1P07737 140 aaKnown RBP5.46□□□□□ -1.54
VPS13B-202ENST00000357162 LOXL3P58215 753 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 CFHR1Q03591 330 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 KIAA1644Q3SXP7 199 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 GUSBP11Q6P575 273 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 Q6ZS52 159 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 ZIC3O60481 467 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 COX7A1P24310 79 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 QRFPP83859 136 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 TFF3Q07654 80 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 LEPROTO15243 131 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 NBR2O15453 112 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 RAMP3O60896 148 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 HCP5Q6MZN7 132 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 TDGF1P13385 188 aa5.46□□□□□ -1.54
VPS13B-202ENST00000357162 KLF5Q13887 457 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-202ENST00000357162 LYPD3O95274 346 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 PF4V1P10720 104 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 BATF2Q8N1L9 274 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 NUP35Q8NFH5 326 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 ADAMTS20P59510 1910 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 CXCL1P09341 107 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 IGFBP2P18065 325 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 CENPVQ7Z7K6 275 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-202ENST00000357162 TMEM258P61165 79 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 UNQ5815/PRO19632Q6UWF5 114 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 IGKV1-9A0A0C4DH69 117 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 COX6A1P12074 109 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 DEFB109BQ30KR1 87 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 MINOS1Q5TGZ0 78 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 ABHD12Q8N2K0 398 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 PAQR4Q8N4S7 273 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-202ENST00000357162 NEU4Q8WWR8 484 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-202ENST00000357162 MINOS1-NBL1R4GNA1 71 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 LY6G5BQ8NDX9 201 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 FNDC4Q9H6D8 234 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-202ENST00000357162 LOC102723996A0A087X1L8 192 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 SLAQ13239 276 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 SPINK14Q6IE38 97 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 MDKP21741 143 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-202ENST00000357162 LGALS9BQ3B8N2 356 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 TMEM95Q3KNT9 176 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 LGALS9CQ6DKI2 356 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 C9orf139Q6ZV77 190 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 DPH3P1Q9H4G8 78 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 ITPR3Q14573 2671 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 GAGE12HA6NDE8 117 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 PRR32B1ATL7 298 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 IL15RAQ13261 267 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 PHLDA1Q8WV24 401 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-202ENST00000357162 C20orf78Q9BR46 151 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 BRWD3Q6RI45 1802 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 SRRM5B3KS81 715 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 PSG3Q16557 428 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 C2orf82Q6UX34 121 aa5.45□□□□□ -1.54
VPS13B-202ENST00000357162 C18orf32Q8TCD1 76 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms