RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PGPA6NDG6 321 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 E7EUB6 86 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 FGF6P10767 208 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 CT45A1Q5HYN5 189 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 NEGR1Q7Z3B1 354 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 CT45A3Q8NHU0 189 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 TPPP3Q9BW30 176 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 FOXA2Q9Y261 457 aaPredicted RBP11.34□□□□□ -0.59
SF1-201ENST00000227503 SLC25A15Q9Y619 301 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 PLCE1Q9P212 2302 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 CGB3P0DN86 165 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 CGB7P0DN87 165 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 LINC01545Q5VT33 79 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 RUSC1-AS1Q66K80 236 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 C1RLQ9NZP8 487 aa11.34□□□□□ -0.59
SF1-201ENST00000227503 MRPL36Q9P0J6 103 aaKnown RBP11.34□□□□□ -0.59
SF1-201ENST00000227503 DSCAML1Q8TD84 2053 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 ZFHX2Q9C0A1 2572 aaPredicted RBP11.33□□□□□ -0.6
SF1-201ENST00000227503 TACC2O95359 2948 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 PSMB11A5LHX3 300 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 P01737 135 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 PCP2Q8IVA1 136 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 WT1P19544 449 aaPredicted RBP11.33□□□□□ -0.6
SF1-201ENST00000227503 ORM2P19652 201 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 CIARTQ8N365 385 aaPredicted RBP11.33□□□□□ -0.6
SF1-201ENST00000227503 MTURNQ8N3F0 131 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 PPP1R35Q8TAP8 253 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 ITLN1Q8WWA0 313 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 NEU4Q8WWR8 484 aaPredicted RBP11.33□□□□□ -0.6
SF1-201ENST00000227503 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 CALYQ9NYX4 217 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 PROCRQ9UNN8 238 aa11.33□□□□□ -0.6
SF1-201ENST00000227503 IGHV3-21A0A0B4J1V1 117 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 TRAV17A0A0B4J275 112 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 K7ERJ3 54 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 LHBP01229 141 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 KIR2DS2P43631 304 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 REG1BP48304 166 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 SEC11AP67812 179 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 NHLH1Q02575 133 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 C17orf58Q2M2W7 97 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 C10orf55Q5SWW7 151 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 C10orf113Q5VZT2 155 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 SEM1Q6ZVN7 128 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 TNFRSF14Q92956 283 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 MS4A6AQ9H2W1 248 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 JKAMPQ9P055 326 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 TEX50A0A1B0GTY4 177 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 APELAP0DMC3 54 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 NMUP48645 174 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 MOGAT3Q86VF5 341 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 NPIPB3Q92617 1050 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 FLYWCH2Q96CP2 140 aaKnown RBP11.32□□□□□ -0.6
SF1-201ENST00000227503 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
SF1-201ENST00000227503 SPAARA0A1B0GVQ0 90 aa11.31□□□□□ -0.6
SF1-201ENST00000227503 H3BRM9 83 aa11.31□□□□□ -0.6
SF1-201ENST00000227503 RNASE2P10153 161 aaKnown RBP11.31□□□□□ -0.6
SF1-201ENST00000227503 ATP5L2Q7Z4Y8 100 aa11.31□□□□□ -0.6
SF1-201ENST00000227503 C18orf15Q96N68 181 aa11.31□□□□□ -0.6
SF1-201ENST00000227503 HSPB8Q9UJY1 196 aa11.31□□□□□ -0.6
SF1-201ENST00000227503 LINC00305Q7Z4B0 112 aa11.31□□□□□ -0.6
SF1-201ENST00000227503 EPDR1Q9UM22 224 aa11.31□□□□□ -0.6
SF1-201ENST00000227503 ZNF257Q9Y2Q1 563 aa11.31□□□□□ -0.6
SF1-201ENST00000227503 A8MWL6 223 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 CD69Q07108 199 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 A0A1W2PPM0 123 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 A6NDN8 102 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 FCGR2BP31994 310 aaPredicted RBP11.3□□□□□ -0.6
SF1-201ENST00000227503 CACNG7P62955 275 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 PRCDQ00LT1 54 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 VSTM2AQ8TAG5 236 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 AGRNO00468 2067 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.3□□□□□ -0.6
SF1-201ENST00000227503 ZZEF1O43149 2961 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 ARMS2P0C7Q2 107 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 IFI27P40305 119 aaPredicted RBP11.3□□□□□ -0.6
SF1-201ENST00000227503 TSSC4Q9Y5U2 329 aaPredicted RBP11.3□□□□□ -0.6
SF1-201ENST00000227503 INSIG2Q9Y5U4 225 aa11.3□□□□□ -0.6
SF1-201ENST00000227503 PTPRZ1P23471 2315 aaPredicted RBP11.29□□□□□ -0.6
SF1-201ENST00000227503 TPRP12270 2363 aaKnown RBP11.29□□□□□ -0.6
SF1-201ENST00000227503 FAM87AP0C7U9 286 aa11.29□□□□□ -0.6
SF1-201ENST00000227503 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
SF1-201ENST00000227503 PDPNQ86YL7 162 aa11.29□□□□□ -0.6
SF1-201ENST00000227503 PRSS3P2Q8NHM4 247 aa11.29□□□□□ -0.6
SF1-201ENST00000227503 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
SF1-201ENST00000227503 GPR82Q96P67 336 aa11.29□□□□□ -0.6
SF1-201ENST00000227503 PPIAL4EA0A075B759 164 aa11.29□□□□□ -0.6
SF1-201ENST00000227503 PPIAL4FP0DN26 164 aa11.29□□□□□ -0.6
SF1-201ENST00000227503 RBPMS2Q6ZRY4 209 aaKnown RBP11.29□□□□□ -0.6
SF1-201ENST00000227503 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
SF1-201ENST00000227503 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 MBD3L4A6NDZ8 208 aaPredicted RBP11.28□□□□□ -0.6
SF1-201ENST00000227503 MBD3L3A6NE82 208 aaPredicted RBP11.28□□□□□ -0.6
SF1-201ENST00000227503 MBD3L5A6NJ08 208 aaPredicted RBP11.28□□□□□ -0.6
SF1-201ENST00000227503 SPRY3O43610 288 aa11.28□□□□□ -0.6
SF1-201ENST00000227503 SAA1P0DJI8 122 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms