RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 NDUFS6O75380 124 aaKnown RBP7.35□□□□□ -1.23
SS18-220ENST00000582092 CRYGCP07315 174 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 RD3LP0DJH9 198 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 PNRC1Q12796 327 aaPredicted RBP7.35□□□□□ -1.23
SS18-220ENST00000582092 RHEBQ15382 184 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 ECSCRQ19T08 205 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 TMEM241Q24JQ0 296 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 ATRAIDQ6UW56 229 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 MIR17HGQ75NE6 70 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 SMIM7Q9BQ49 75 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 C20orf24Q9BUV8 137 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 SCRT1Q9BWW7 348 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 SEPSECSQ9HD40 501 aaKnown RBP7.35□□□□□ -1.23
SS18-220ENST00000582092 RNF24Q9Y225 148 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 HIGD1AQ9Y241 93 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 ZFHX3Q15911 3703 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 TNCP24821 2201 aa7.35□□□□□ -1.23
SS18-220ENST00000582092 C7orf77A4D0Y5 90 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 IGHV4-38-2P0DP08 117 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 LYZP61626 148 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 ZNF90Q03938 601 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 LY6EQ16553 131 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 AWAT1Q58HT5 328 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 PVRIGQ6DKI7 326 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 IL17RELQ6ZVW7 336 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 C16orf82Q7Z2V1 217 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 OR51G1Q8NGK1 321 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 SGMS2Q8NHU3 365 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 SPATA3Q8NHX4 192 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 ZNF418Q8TF45 676 aaPredicted RBP7.34□□□□□ -1.23
SS18-220ENST00000582092 Q8WTZ3 238 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 RPUSD4Q96CM3 377 aaKnown RBP7.34□□□□□ -1.23
SS18-220ENST00000582092 GAR1Q9NY12 217 aaKnown RBP7.34□□□□□ -1.23
SS18-220ENST00000582092 NAT8Q9UHE5 227 aa7.34□□□□□ -1.23
SS18-220ENST00000582092 IGKV1OR2-108A0A075B7D4 117 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 IGHV7-81A0A0B4J1V7 117 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 H3BUX3 64 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 I3L2K1 104 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 TCF21O43680 179 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 MFAP2P55001 183 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 SSBP2P81877 361 aaPredicted RBP7.33□□□□□ -1.24
SS18-220ENST00000582092 TIGITQ495A1 244 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 SPATA31B1PQ5VZV4 182 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 TMEM88Q6PEY1 159 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 LINC00305Q7Z4B0 112 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 TMEM219Q86XT9 240 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 OR5AU1Q8NGC0 362 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 FAM110DQ8TAY7 271 aaPredicted RBP7.33□□□□□ -1.24
SS18-220ENST00000582092 JMJD8Q96S16 334 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 TXN2Q99757 166 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 PAXXQ9BUH6 204 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 OR51M1Q9H341 326 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 C21orf62Q9NYP8 219 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 FBXL7Q9UJT9 491 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 ARL2-SNX15V9GYD0 113 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 VPS13CQ709C8 3753 aa7.33□□□□□ -1.24
SS18-220ENST00000582092 OR2J3O76001 311 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 OR2C1O95371 312 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 MT-ND4LP03901 98 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 CD81P60033 236 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 UBE2L3P68036 154 aaKnown RBP7.32□□□□□ -1.24
SS18-220ENST00000582092 ADIRFQ15847 76 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 KLF17Q5JT82 389 aaPredicted RBP7.32□□□□□ -1.24
SS18-220ENST00000582092 C19orf35Q6ZS72 473 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 C5orf56Q8N8D9 126 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 VN1R17PQ8TDU5 208 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 AJUBAQ96IF1 538 aa7.32□□□□□ -1.24
SS18-220ENST00000582092 IGLV11-55A0A075B6I3 123 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 IGKV1D-37A0A075B6S9 117 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 TRAV41A0A0B4J266 112 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 K7EIM0 57 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 DNASE2O00115 360 aaPredicted RBP7.31□□□□□ -1.24
SS18-220ENST00000582092 ATP6V0E1O15342 81 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 TOMM40O96008 361 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 OR10J4P0C629 311 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 PSG1P11464 419 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 AKR1C3P42330 323 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 YPEL3P61236 119 aaPredicted RBP7.31□□□□□ -1.24
SS18-220ENST00000582092 ATP5G2Q06055 141 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 KIAA0141Q14154 515 aaPredicted RBP7.31□□□□□ -1.24
SS18-220ENST00000582092 TMEM37Q8WXS4 190 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 EEF1AKMT3Q96AZ1 226 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 OR5B12Q96R08 314 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 PARLQ9H300 379 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 GNB4Q9HAV0 340 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 SDF2L1Q9HCN8 221 aa7.31□□□□□ -1.24
SS18-220ENST00000582092 MRPL36Q9P0J6 103 aaKnown RBP7.31□□□□□ -1.24
SS18-220ENST00000582092 A0A087WWC5 75 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 TRAV5A0A0B4J249 113 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 A0A1W2PRE2 83 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 FAM74A7A6NL05 159 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 NDUFB4O95168 129 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 NDUFB8O95169 186 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 IGLC1P0CG04 106 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 ATF4P18848 351 aaPredicted RBP7.3□□□□□ -1.24
SS18-220ENST00000582092 S100PP25815 95 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 ATP5G3P48201 142 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 PLP1P60201 277 aa7.3□□□□□ -1.24
SS18-220ENST00000582092 SUMO1P63165 101 aaKnown RBP7.3□□□□□ -1.24
SS18-220ENST00000582092 RHOGP84095 191 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms