RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ATP6V0BQ99437 205 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 TTTY12Q9BZ98 90 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 MBNL3Q9NUK0 354 aaKnown RBP7.83□□□□□ -1.16
CCDC40-212ENST00000574799 RABAC1Q9UI14 185 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 BOKQ9UMX3 212 aaPredicted RBP7.83□□□□□ -1.16
CCDC40-212ENST00000574799 DUTP33316 252 aaKnown RBP7.83□□□□□ -1.16
CCDC40-212ENST00000574799 C3AR1Q16581 482 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 COLCA1Q6ZS62 124 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 WFDC3Q8IUB2 231 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 SSUH2Q9Y2M2 353 aa7.83□□□□□ -1.16
CCDC40-212ENST00000574799 AHRRA9YTQ3 701 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 GDF5OSQ5U4N7 250 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 WDR31Q8NA23 367 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 RPP21Q9H633 154 aaKnown RBP7.82□□□□□ -1.16
CCDC40-212ENST00000574799 LRBAP50851 2863 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 C21orf140B9A014 251 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 ERHP84090 104 aaKnown RBP7.82□□□□□ -1.16
CCDC40-212ENST00000574799 PSG3Q16557 428 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 MLANAQ16655 118 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 SLC35E4Q6ICL7 350 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 PRSS57Q6UWY2 283 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 MDP1Q86V88 176 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 H1FXQ92522 213 aaKnown RBP7.82□□□□□ -1.16
CCDC40-212ENST00000574799 CACNG7P62955 275 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 KLF5Q13887 457 aaPredicted RBP7.82□□□□□ -1.16
CCDC40-212ENST00000574799 ADAMTSL5Q6ZMM2 481 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 LINC00696Q6ZRV3 163 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 Q8N7P7 452 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 IDI2-AS1Q9NZ38 188 aa7.82□□□□□ -1.16
CCDC40-212ENST00000574799 FXYD7P58549 80 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 ALKBH6Q3KRA9 238 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 SVIPQ8NHG7 77 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 NPFFR1Q9GZQ6 430 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 TNCP24821 2201 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 FTH1P19P0C7X4 201 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 VDAC2P45880 294 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-212ENST00000574799 ATP5L2Q7Z4Y8 100 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 MTURNQ8N3F0 131 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 ZADH2Q8N4Q0 377 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 NHP2Q9NX24 153 aaKnown RBP7.81□□□□□ -1.16
CCDC40-212ENST00000574799 SPRR3Q9UBC9 169 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 PRB4P10163 310 aaPredicted RBP7.81□□□□□ -1.16
CCDC40-212ENST00000574799 TRIP6Q15654 476 aaKnown RBP7.81□□□□□ -1.16
CCDC40-212ENST00000574799 TIMM23BQ5SRD1 257 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 OR1L4Q8NGR5 311 aa7.81□□□□□ -1.16
CCDC40-212ENST00000574799 A0A1W2PPM0 123 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 GAGE12HA6NDE8 117 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 RBPMS2Q6ZRY4 209 aaKnown RBP7.8□□□□□ -1.16
CCDC40-212ENST00000574799 LRRC29Q8WV35 223 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 SLC25A33Q9BSK2 321 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 TMSB15BA0A087X1C1 80 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 LGALS7P47929 136 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 BRWD1-AS2P59051 145 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 RIGQ13278 110 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 PRNTQ86SH4 94 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 ZNF414Q96IQ9 312 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 GPR82Q96P67 336 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 JMJD8Q96S16 334 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 ANKRD11Q6UB99 2663 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-212ENST00000574799 PRSS1P07477 247 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 CEACAM3P40198 252 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 TCF15Q12870 199 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 ABHD17BQ5VST6 288 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 WIPF2Q8TF74 440 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-212ENST00000574799 SRSF12Q8WXF0 261 aaKnown RBP7.8□□□□□ -1.16
CCDC40-212ENST00000574799 C18orf15Q96N68 181 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 PRNDQ9UKY0 176 aa7.8□□□□□ -1.16
CCDC40-212ENST00000574799 hADV38S2A0JD32 116 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 C15orf61A6NNL5 157 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 TM4SF5O14894 197 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 SLC25A17O43808 307 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 OR2J3O76001 311 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 P0C879 139 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 ZNF146Q15072 292 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 FAM214BQ7L5A3 538 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 DEFB108BQ8NET1 73 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 C19orf24Q9BVV8 132 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 METRNQ9UJH8 293 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 KIR2DS2P43631 304 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 WDR82Q6UXN9 313 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 Q6ZR03 302 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 OR4X2Q8NGF9 303 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 RND1Q92730 232 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 COQ2Q96H96 371 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 INTS1Q8N201 2190 aaKnown RBP7.79□□□□□ -1.16
CCDC40-212ENST00000574799 TRAV26-1A0A087WT03 109 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 IGLV2-8P01709 118 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 PRR20EP86478 221 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 PRR20CP86479 221 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 PRR20DP86480 221 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 PRR20BP86481 221 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 PRR20AP86496 221 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 BCL6BQ8N143 479 aaPredicted RBP7.79□□□□□ -1.16
CCDC40-212ENST00000574799 NPIPB3Q92617 1050 aa7.79□□□□□ -1.16
CCDC40-212ENST00000574799 MRPL32Q9BYC8 188 aaKnown RBP7.79□□□□□ -1.16
CCDC40-212ENST00000574799 ZFHX2Q9C0A1 2572 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-212ENST00000574799 IGHV3OR15-7A0A075B7D8 119 aa7.78□□□□□ -1.16
CCDC40-212ENST00000574799 CD300EQ496F6 205 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-212ENST00000574799 OR2Z1Q8NG97 314 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms