RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TOMM40O96008 361 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 PRM2P04554 102 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 CLEC2LP0C7M8 214 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 HRH1P35367 487 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 NUP62P37198 522 aaPredicted RBP7.58□□□□□ -1.2
DDX41-216ENST00000513562 AKR1C2P52895 323 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 IDNKQ5T6J7 187 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 CDPF1Q6NVV7 123 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 EBLN2Q6P2I7 272 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 AMTNQ6UX39 209 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 Q6ZRN7 208 aaPredicted RBP7.58□□□□□ -1.2
DDX41-216ENST00000513562 OR4C16Q8NGL9 310 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 GPR146Q96CH1 333 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 CBY3A6NI87 242 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 ZNF705GA8MUZ8 300 aaPredicted RBP7.57□□□□□ -1.2
DDX41-216ENST00000513562 J3QL48 77 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 NXPH3O95157 252 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 ATP6V1G2O95670 118 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 RD3LP0DJH9 198 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 HTR2BP41595 481 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 UCP3P55916 312 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 MXD1Q05195 221 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 LYSMD2Q8IV50 215 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 RNASEH2CQ8TDP1 164 aaKnown RBP7.57□□□□□ -1.2
DDX41-216ENST00000513562 RNF125Q96EQ8 232 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 ABHD1Q96SE0 405 aa7.57□□□□□ -1.2
DDX41-216ENST00000513562 ISLRO14498 428 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 PSG1P11464 419 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 HLA-DMAP28067 261 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 FUSP35637 526 aaKnown RBP eCLIP7.56□□□□□ -1.2
DDX41-216ENST00000513562 LINC00315P59091 139 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 RND3P61587 244 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 TSPAN5P62079 268 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 FCN2Q15485 313 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 AARDQ4LEZ3 155 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 C2orf83Q53S99 150 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 OR8G2PQ6IF36 304 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 OR51G1Q8NGK1 321 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 C17orf77Q96MU5 243 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 VCX3BQ9H321 246 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 ZNF586Q9NXT0 402 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 DOK5Q9P104 306 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 MDFICQ9P1T7 246 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 BLOC1S6Q9UL45 172 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 SSR3Q9UNL2 185 aa7.56□□□□□ -1.2
DDX41-216ENST00000513562 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
DDX41-216ENST00000513562 A0A0G2JRQ6 117 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 CRXO43186 299 aaPredicted RBP7.55□□□□□ -1.2
DDX41-216ENST00000513562 ATG12O94817 140 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 INSP01308 110 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 ELK1P19419 428 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 KRTAP10-1P60331 282 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 SPCS3P61009 180 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 B2MP61769 119 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 SUPT4H1P63272 117 aaKnown RBP7.55□□□□□ -1.2
DDX41-216ENST00000513562 TMEM69Q5SWH9 247 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 C1orf194Q5T5A4 169 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 SAMD13Q5VXD3 122 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 TMEM170AQ8WVE7 144 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 NPIPB3Q92617 1050 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 ZNF503Q96F45 646 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 S100A16Q96FQ6 103 aaKnown RBP7.55□□□□□ -1.2
DDX41-216ENST00000513562 ACY3Q96HD9 319 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 C20orf173Q96LM9 149 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 UHRF2Q96PU4 802 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 TP53RKQ96S44 253 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 RPRMQ9NS64 109 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 PFDN2Q9UHV9 154 aa7.55□□□□□ -1.2
DDX41-216ENST00000513562 MRPS16Q9Y3D3 137 aaKnown RBP7.55□□□□□ -1.2
DDX41-216ENST00000513562 TMEM127O75204 238 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 SMR3BP02814 79 aaPredicted RBP7.54□□□□□ -1.2
DDX41-216ENST00000513562 AZU1P20160 251 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 ICAM4Q14773 271 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 ESRGQ1W209 222 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 SPINK13Q1W4C9 94 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 ETFRF1Q6IPR1 90 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 Q6ZSN1 163 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 SLC24A4Q8NFF2 622 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 OR52E5Q8NH55 327 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 GNPNAT1Q96EK6 184 aaPredicted RBP7.54□□□□□ -1.2
DDX41-216ENST00000513562 PBDC1Q9BVG4 233 aa7.54□□□□□ -1.2
DDX41-216ENST00000513562 TRAV26-1A0A087WT03 109 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 M0R2Z0 102 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 EREGO14944 169 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 PRSS3P35030 304 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 ERVFC1-1P60608 527 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 UBE2NLQ5JXB2 153 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 OR11H7Q8NGC8 314 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 RXFP4Q8TDU9 374 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 NRG4Q8WWG1 115 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 FCGR1BQ92637 280 aa7.53□□□□□ -1.2
DDX41-216ENST00000513562 RRNAD1Q96FB5 475 aaKnown RBP7.53□□□□□ -1.2
DDX41-216ENST00000513562 ZNF486Q96H40 463 aaPredicted RBP7.53□□□□□ -1.2
DDX41-216ENST00000513562 HEYLQ9NQ87 328 aaPredicted RBP7.53□□□□□ -1.2
DDX41-216ENST00000513562 C3orf85A0A1B0GTC6 90 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 PGAM2P15259 253 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 PI3P19957 117 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 M6PRP20645 277 aa7.52□□□□□ -1.21
DDX41-216ENST00000513562 RCVRNP35243 200 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms