RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	YIF1A	O95070	293 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	MT-CO2	P00403	227 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	CD5	P06127	495 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	PVALB	P20472	110 aa	Predicted RBP	5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	S100A11	P31949	105 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	FCGR2B	P31994	310 aa	Predicted RBP	5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	NKX2-1	P43699	371 aa	Predicted RBP	5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	ELL	P55199	621 aa	Predicted RBP	5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	HAGH	Q16775	308 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	BEAN1	Q3B7T3	259 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	ANKRD55	Q3KP44	614 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	TM4SF20	Q53R12	229 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	C2orf83	Q53S99	150 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	SPINK9	Q5DT21	86 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	ZNF431	Q8TF32	576 aa	Predicted RBP	5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	SCARB1	Q8WTV0	552 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	ZNF479	Q96JC4	524 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	ZNF436	Q9C0F3	470 aa	Predicted RBP	5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	TMEM231	Q9H6L2	316 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	SIGLEC8	Q9NYZ4	499 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	FLVCR2	Q9UPI3	526 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340		A0A0G2JRQ6	117 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	PPP5D1	E7EU14	171 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	ARPC5	O15511	151 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	OR2C1	O95371	312 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	IGHV3-23	P01764	117 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	IL5	P05113	134 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	RNASE2	P10153	161 aa	Known RBP	5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	BTC	P35070	178 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	CYCS	P99999	105 aa	Known RBP	5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	DEFA5	Q01523	94 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	IAH1	Q2TAA2	248 aa	Predicted RBP	5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	GSG1L	Q6UXU4	331 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340		Q6ZRM9	215 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	S100A7A	Q86SG5	101 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	GTSCR1	Q86UQ5	136 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	CACNG8	Q8WXS5	425 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	SLC35E1	Q96K37	410 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	RAB40C	Q96S21	281 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	NKX6-2	Q9C056	277 aa	Predicted RBP	5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	MFF	Q9GZY8	342 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	RBKS	Q9H477	322 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	DAZ1	Q9NQZ3	744 aa	Known RBP	5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	PRR13	Q9NZ81	148 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	MRPL27	Q9P0M9	148 aa	Known RBP	5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	GSKIP	Q9P0R6	139 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	NAGK	Q9UJ70	344 aa		5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	STRAP	Q9Y3F4	350 aa	Known RBP	5.73	□□□□□ -1.49
NR1I3-231	ENST00000512340	PRKDC	P78527	4128 aa	Known RBP	5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340		A0A1W2PS18	150 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	SNRPGP15	A8MWD9	76 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	INMT-MINDY4	F8WBC2	141 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340		I3L2K1	104 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340		K7EIM0	57 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340		K7EMT4	169 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340		K7EP13	123 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	CCS	O14618	274 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	ZNF25	P17030	456 aa	Predicted RBP	5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	RAB5C	P51148	216 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	EGFEM1P	Q0D2K5	195 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	SLA	Q13239	276 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	DEFB121	Q5J5C9	76 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	OR1S2	Q8NGQ3	325 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	OR4X1	Q8NH49	305 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	MRAP	Q8TCY5	172 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340		Q8WTZ3	238 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	NUDT11	Q96G61	164 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	GRAMD2B	Q96HH9	432 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	CCDC140	Q96MF4	163 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	C20orf24	Q9BUV8	137 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	CLEC5A	Q9NY25	188 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	TBC1D24	Q9ULP9	559 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340		S4R3C0	116 aa		5.72	□□□□□ -1.49
NR1I3-231	ENST00000512340	ELOA3C	A0A087WX78	387 aa	Predicted RBP	5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	IGHV3-21	A0A0B4J1V1	117 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	TRAV25	A0A0B4J276	109 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	C2orf70	A6NJV1	201 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	C15orf62	A8K5M9	175 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340		A8MWP6	167 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	SSNA1	O43805	119 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	PITX3	O75364	302 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	ADAP1	O75689	374 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	NXPH3	O95157	252 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	CFD	P00746	253 aa	Predicted RBP	5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	TRBV12-3	P01733	135 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	PET100	P0DJ07	73 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	SPP1	P10451	314 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	CMC4	P56277	68 aa	Predicted RBP	5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	TAS2R30	P59541	319 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	PAFAH1B2	P68402	229 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	BSX	Q3C1V8	233 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	SPANXN5	Q5MJ07	72 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	C19orf35	Q6ZS72	473 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM190	Q8WZ59	177 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	C2orf50	Q96LR7	162 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	PACRG	Q96M98	296 aa	Predicted RBP	5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	TMEM208	Q9BTX3	173 aa		5.71	□□□□□ -1.5
NR1I3-231	ENST00000512340	CSTL1	Q9H114	145 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms