RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZNF674Q2M3X9 581 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 DEFB112Q30KQ8 113 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 CYB5R2Q6BCY4 276 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 WFDC11Q8NEX6 87 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 TMEM37Q8WXS4 190 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 RPUSD4Q96CM3 377 aaKnown RBP6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 TMEM68Q96MH6 324 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 UHRF2Q96PU4 802 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 SMIM7Q9BQ49 75 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 TXNDC17Q9BRA2 123 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 C20orf24Q9BUV8 137 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 SLC25A2Q9BXI2 301 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 FBXL7Q9UJT9 491 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 HIGD1AQ9Y241 93 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 FLNAP21333 2647 aaKnown RBP6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 CSMD2Q7Z408 3487 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 TRAV30A0A087WSZ9 112 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 TRAV41A0A0B4J266 112 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 FAM74A7A6NL05 159 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 ZNF727A8MUV8 499 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 G3V318 75 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 H3BQ15 152 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 SMAD7O15105 426 aaKnown RBP6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 PDE6DO43924 150 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 HYPMO75409 117 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 NDUFB8O95169 186 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 IGKV1-17P01599 117 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 IGHV3-23P01764 117 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 IGHV4-59P01825 116 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 AMY1AP04745 511 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 OR10J4P0C629 311 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 PSG1P11464 419 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 ORM2P19652 201 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 PLP1P60201 277 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 RHOGP84095 191 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 FAM74A3Q4VXF1 159 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 MORN5Q5VZ52 161 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 C9orf139Q6ZV77 190 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 LINC00305Q7Z4B0 112 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 CBLN2Q8IUK8 224 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 BCL6BQ8N143 479 aaPredicted RBP6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 OR51G1Q8NGK1 321 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 OR5R1Q8NH85 324 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 SUN5Q8TC36 379 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 RNF125Q96EQ8 232 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 TVP23CQ96ET8 276 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 PAXXQ9BUH6 204 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 PARLQ9H300 379 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 DNAJC4Q9NNZ3 241 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 RPS10P5Q9NQ39 176 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 YTHDF2Q9Y5A9 579 aaKnown RBP6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 GCN1Q92616 2671 aaKnown RBP6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 NBPF19A0A087WUL8 3843 aa6.33□□□□□ -1.4
PDZRN3-212ENST00000498048 SCO2A0A1W2PP80 73 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 OR2T8A6NH00 312 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 H3BRN7 92 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 IL4P05112 153 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 PYYP10082 97 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 GPR183P32249 361 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 PNRC1Q12796 327 aaPredicted RBP6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 C15orf32Q32M92 178 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 C19orf54Q5BKX5 351 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 TMEM88Q6PEY1 159 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 TEX29Q8N6K0 151 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 VN1R17PQ8TDU5 208 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 EEF1AKMT3Q96AZ1 226 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 ZNF503Q96F45 646 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 FAM167A-AS1Q96KT0 104 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 NAT8Q9UHE5 227 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 VPREB3Q9UKI3 123 aa6.32□□□□□ -1.4
PDZRN3-212ENST00000498048 TRAV5A0A0B4J249 113 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 FAM223BA6NKX1 122 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 LINC01548A6NM66 108 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 F8W735 103 aaPredicted RBP6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 DNASE2O00115 360 aaPredicted RBP6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 AP4M1O00189 453 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 NUPL2O15504 423 aaKnown RBP6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 IGHG2P01859 326 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 RD3LP0DJH9 198 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 GP9P14770 177 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 AKR1C3P42330 323 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 TPPP2P59282 170 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 YPEL3P61236 119 aaPredicted RBP6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 ADIRFQ15847 76 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 FAM223AQ8IWN6 122 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 NECAP1Q8NC96 275 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 ZNF502Q8TBZ5 544 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 C11orf52Q96A22 123 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 MDFIQ99750 246 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 TXN2Q99757 166 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 FOXC2Q99958 501 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 OR51M1Q9H341 326 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 GNB4Q9HAV0 340 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 GAR1Q9NY12 217 aaKnown RBP6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
PDZRN3-212ENST00000498048 CELSR1Q9NYQ6 3014 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms