RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 IMMP2LQ96T52 175 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 ADAT1Q9BUB4 502 aaKnown RBP4.49□□□□□ -1.69
RBM39-233ENST00000482563 NIT2Q9NQR4 276 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 COL27A1Q8IZC6 1860 aaPredicted RBP4.48□□□□□ -1.69
RBM39-233ENST00000482563 ZNF728P0DKX0 622 aa4.48□□□□□ -1.69
RBM39-233ENST00000482563 RPL28P46779 137 aaKnown RBP4.48□□□□□ -1.69
RBM39-233ENST00000482563 DSCR10P59022 87 aa4.48□□□□□ -1.69
RBM39-233ENST00000482563 SCIMPQ6UWF3 145 aa4.48□□□□□ -1.69
RBM39-233ENST00000482563 SIGLECL1Q8N7X8 197 aa4.48□□□□□ -1.69
RBM39-233ENST00000482563 OR10P1Q8NGE3 313 aa4.48□□□□□ -1.69
RBM39-233ENST00000482563 SCGB3A1Q96QR1 104 aa4.48□□□□□ -1.69
RBM39-233ENST00000482563 DSPPQ9NZW4 1301 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 CDK5RAP2Q96SN8 1893 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 UHRF1BP1LA0JNW5 1464 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 MEIS3P1A6NDR6 274 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 H3BMG7 143 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 C3orf84H3BNL1 204 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.47□□□□□ -1.69
RBM39-233ENST00000482563 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 IFT20Q8IY31 132 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 MARCOQ9UEW3 520 aaPredicted RBP4.47□□□□□ -1.69
RBM39-233ENST00000482563 HEY1Q9Y5J3 304 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 OBSL1O75147 1896 aa4.47□□□□□ -1.69
RBM39-233ENST00000482563 LOC100130705A0A1B0GUX0 176 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 NPFFO15130 113 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 DNAH10OSP0CZ25 163 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 NDUFA6P56556 154 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 COPZ1P61923 177 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 DIAPH2-AS1Q14236 149 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 GLIPR1L1Q6UWM5 242 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 SOSTDC1Q6X4U4 206 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 CTAGE3PQ8IX95 158 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 Q8NAQ8 132 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 OR4S1Q8NGB4 309 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 NAT14Q8WUY8 206 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 NPCDR1Q9BY65 106 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 DISP2A7MBM2 1401 aa4.46□□□□□ -1.69
RBM39-233ENST00000482563 SCRIBQ14160 1630 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 IGLV3-9A0A075B6K5 115 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 ZNF727A8MUV8 499 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 K7EM74 188 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 UBFD1O14562 309 aaKnown RBP4.46□□□□□ -1.7
RBM39-233ENST00000482563 GPX1P07203 203 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 ZNF181Q2M3W8 571 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 RNASE10Q5GAN6 216 aaKnown RBP4.46□□□□□ -1.7
RBM39-233ENST00000482563 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 EPDR1Q9UM22 224 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 S4R3C0 116 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 THADAQ6YHU6 1953 aa4.46□□□□□ -1.7
RBM39-233ENST00000482563 CCDC88AQ3V6T2 1871 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 A0A0J9YW62 118 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 F6UZH7 168 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 TP53I11O14683 189 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 DEFA4P12838 97 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 RPL35P42766 123 aaKnown RBP4.45□□□□□ -1.7
RBM39-233ENST00000482563 ZNF117Q03924 483 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 TAF9Q16594 264 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 KPRPQ5T749 579 aaPredicted RBP4.45□□□□□ -1.7
RBM39-233ENST00000482563 NOXRED1Q6NXP6 359 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 LYPD6Q86Y78 171 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 ZNF418Q8TF45 676 aaPredicted RBP4.45□□□□□ -1.7
RBM39-233ENST00000482563 YPEL2Q96QA6 119 aa4.45□□□□□ -1.7
RBM39-233ENST00000482563 YEATS2Q9ULM3 1422 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 ARHGEF11O15085 1522 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 FAM135AQ9P2D6 1515 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 LTBP4Q8N2S1 1624 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 FAM92AA1XBS5 289 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 GGTLC3B5MD39 225 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 J3QR89 54 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 NDUFB3O43676 98 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 ZNF22P17026 224 aaPredicted RBP4.44□□□□□ -1.7
RBM39-233ENST00000482563 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 C3orf62Q6ZUJ4 267 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 FGF13Q92913 245 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 NYNRINQ9P2P1 1898 aaKnown RBP4.44□□□□□ -1.7
RBM39-233ENST00000482563 SCN4AP35499 1836 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 LCTP09848 1927 aa4.44□□□□□ -1.7
RBM39-233ENST00000482563 IGHV3OR16-8A0A075B7F1 116 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 TCRAP04437 139 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 IL4P05112 153 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 GZMBP10144 247 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 HLA-EP13747 358 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 CD24P25063 80 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 EIF2B2P49770 351 aaKnown RBP4.43□□□□□ -1.7
RBM39-233ENST00000482563 FOXA3P55318 350 aaPredicted RBP4.43□□□□□ -1.7
RBM39-233ENST00000482563 PATE2Q6UY27 113 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 ASF1BQ9NVP2 202 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 ARHGAP31Q2M1Z3 1444 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 ARHGEF28Q8N1W1 1705 aaKnown RBP4.43□□□□□ -1.7
RBM39-233ENST00000482563 ZNF670-ZNF695F2Z2N8 137 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 HIST1H2BKO60814 126 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 HIST1H2BJP06899 126 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 METTL15P1P0C7V9 234 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 MUC1P15941 1255 aaPredicted RBP4.43□□□□□ -1.7
RBM39-233ENST00000482563 VEGFCP49767 419 aa4.43□□□□□ -1.7
RBM39-233ENST00000482563 RBP2P50120 134 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms