RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 ZNF546Q86UE3 836 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 OR11H4Q8NGC9 324 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 MGST2Q99735 147 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 SMIM3Q9BZL3 60 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 WFDC1Q9HC57 220 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 DAZ1Q9NQZ3 744 aaKnown RBP8.01□□□□□ -1.13
SMC1A-206ENST00000470241 SIGLEC8Q9NYZ4 499 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 TNFSF18Q9UNG2 199 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 WDR83OSQ9Y284 106 aa8.01□□□□□ -1.13
SMC1A-206ENST00000470241 UBE2L5PA0A1B0GUS4 154 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 WI2-2373I1.2A0A1W2PRP0 233 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 WIPF1O43516 503 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 IL4P05112 153 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 FABP1P07148 127 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 USF2Q15853 346 aaPredicted RBP8□□□□□ -1.13
SMC1A-206ENST00000470241 BTNL8Q6UX41 500 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 TCTE3Q8IZS6 198 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 OR51G1Q8NGK1 321 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 MARC2Q969Z3 335 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 RNF125Q96EQ8 232 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 GINS3Q9BRX5 216 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 MRPL27Q9P0M9 148 aaKnown RBP8□□□□□ -1.13
SMC1A-206ENST00000470241 SLC45A2Q9UMX9 530 aa8□□□□□ -1.13
SMC1A-206ENST00000470241 IGHV3-49A0A0A0MS15 119 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 IGHV7-4-1A0A0J9YVY3 117 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 AGPAT2O15120 278 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 IGLV1-51P01701 117 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 APOHP02749 345 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-206ENST00000470241 CRYBB3P26998 211 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 NUP62P37198 522 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-206ENST00000470241 INSL3P51460 131 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 DEFB114Q30KQ6 69 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 AKAP14Q86UN6 197 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 INO80EQ8NBZ0 244 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-206ENST00000470241 ATP5SQ99766 215 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 GPR61Q9BZJ8 451 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 FBXL17Q9UF56 701 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 MLXQ9UH92 298 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 SMPXQ9UHP9 88 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 SELENOKQ9Y6D0 94 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 U3KQE9 123 aa7.99□□□□□ -1.13
SMC1A-206ENST00000470241 MGAM2Q2M2H8 2515 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 IGHV3OR16-13A0A075B7E8 117 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 IGHV3-74A0A0B4J1X5 117 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 CHEK1O14757 476 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 ARPC5O15511 151 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 DFFBO76075 338 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 CFDP00746 253 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-206ENST00000470241 LINC00869P0C866 280 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 FGF7P21781 194 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 CAMLGP49069 296 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 LYZP61626 148 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 SELENOTP62341 195 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 CD300CQ08708 224 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 RAB31Q13636 194 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 OPCMLQ14982 345 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 STPG3Q8N7X2 389 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 BPIFCQ8NFQ6 507 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 METTL26Q96S19 204 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 RHPN1-AS1Q9BWJ2 59 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 GGTLC1Q9BX51 225 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 WDR61Q9GZS3 305 aaKnown RBP7.98□□□□□ -1.13
SMC1A-206ENST00000470241 VSIRQ9H7M9 311 aa7.98□□□□□ -1.13
SMC1A-206ENST00000470241 IGHV3-66A0A0C4DH42 116 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 IZUMO1RA6ND01 250 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 HMSDA8MTL9 139 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 MPDU1O75352 247 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 HNRNPCP07910 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMC1A-206ENST00000470241 NPPCP23582 126 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 AP2S1P53680 142 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-206ENST00000470241 PLP1P60201 277 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 KRTAP10-11P60412 298 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 PRR20EP86478 221 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 PRR20CP86479 221 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 PRR20DP86480 221 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 PRR20BP86481 221 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 PRR20AP86496 221 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 EGFEM1PQ0D2K5 195 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 BEAN1Q3B7T3 259 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 CD300EQ496F6 205 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-206ENST00000470241 KPRPQ5T749 579 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-206ENST00000470241 MIC13Q5XKP0 118 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 DYNLRB2Q8TF09 96 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 ST8SIA2Q92186 375 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 PBDC1Q9BVG4 233 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 NPCDR1Q9BY65 106 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 MFFQ9GZY8 342 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 TECRQ9NZ01 308 aaKnown RBP7.97□□□□□ -1.13
SMC1A-206ENST00000470241 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
SMC1A-206ENST00000470241 NOTCH3Q9UM47 2321 aa7.96□□□□□ -1.13
SMC1A-206ENST00000470241 IFNA5P01569 189 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 C1QBP02746 253 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 ORM2P19652 201 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 CXCL2P19875 107 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 RPL29P47914 159 aaKnown RBP7.96□□□□□ -1.14
SMC1A-206ENST00000470241 EIF2B2P49770 351 aaKnown RBP7.96□□□□□ -1.14
SMC1A-206ENST00000470241 PATE2Q6UY27 113 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 OR1B1Q8NGR6 318 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 RNF2Q99496 336 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 NEURL2Q9BR09 285 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms