RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 C21orf62Q9NYP8 219 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 TLN2Q9Y4G6 2542 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 ELOA3CA0A087WX78 387 aaPredicted RBP14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 TRBV9A0A0B4J1U6 114 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 C11orf94C9JXX5 98 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 OR7C2O60412 319 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 HIST1H1BP16401 226 aaKnown RBP14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 ATP5G3P48201 142 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 TAS2R45P59539 299 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 PLP1P60201 277 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 KIAA0141Q14154 515 aaPredicted RBP14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 Q6ZS46 218 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 LINC00305Q7Z4B0 112 aa14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 ZNF48Q96MX3 618 aaPredicted RBP14.69□□□□□ -0.06
CHRNA4-203ENST00000467563 TRAV41A0A0B4J266 112 aa14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 GNG7O60262 68 aa14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 IGHG2P01859 326 aa14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 RD3LP0DJH9 198 aa14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 RHOGP84095 191 aa14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 CST9LP1Q5W188 147 aa14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 PQLC2Q6ZP29 291 aa14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 C16orf82Q7Z2V1 217 aa14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 YTHDF2Q9Y5A9 579 aaKnown RBP14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 PUS1Q9Y606 427 aaKnown RBP eCLIP14.68□□□□□ -0.06
CHRNA4-203ENST00000467563 HYPMO75409 117 aa14.67□□□□□ -0.06
CHRNA4-203ENST00000467563 C15orf32Q32M92 178 aa14.67□□□□□ -0.06
CHRNA4-203ENST00000467563 OR5AU1Q8NGC0 362 aa14.67□□□□□ -0.06
CHRNA4-203ENST00000467563 IGF1P05019 195 aa14.67□□□□□ -0.06
CHRNA4-203ENST00000467563 OR10J4P0C629 311 aa14.67□□□□□ -0.06
CHRNA4-203ENST00000467563 LYZP61626 148 aa14.67□□□□□ -0.06
CHRNA4-203ENST00000467563 Q56UQ5 140 aa14.67□□□□□ -0.06
CHRNA4-203ENST00000467563 C20orf24Q9BUV8 137 aa14.67□□□□□ -0.06
CHRNA4-203ENST00000467563 FAM74A7A6NL05 159 aa14.66□□□□□ -0.06
CHRNA4-203ENST00000467563 TMEM250H0YL14 139 aa14.66□□□□□ -0.06
CHRNA4-203ENST00000467563 H3BQ15 152 aa14.66□□□□□ -0.06
CHRNA4-203ENST00000467563 FAM74A3Q4VXF1 159 aa14.66□□□□□ -0.06
CHRNA4-203ENST00000467563 AWAT1Q58HT5 328 aa14.66□□□□□ -0.06
CHRNA4-203ENST00000467563 VN1R17PQ8TDU5 208 aa14.66□□□□□ -0.06
CHRNA4-203ENST00000467563 MS4A10Q96PG2 267 aa14.66□□□□□ -0.06
CHRNA4-203ENST00000467563 TRAV30A0A087WSZ9 112 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 TOMM40O96008 361 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 OR51G1Q8NGK1 321 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 NOL4LQ96MY1 436 aaPredicted RBP14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 TMEM167BQ9NRX6 74 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 OR2T8A6NH00 312 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 M0R036 132 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 DNASE2O00115 360 aaPredicted RBP14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 NPPCP23582 126 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 Q6YL49 198 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 NECAP1Q8NC96 275 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 SUN5Q8TC36 379 aa14.65□□□□□ -0.06
CHRNA4-203ENST00000467563 NUPL2O15504 423 aaKnown RBP14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 NDUFS6O75380 124 aaKnown RBP14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 FABP1P07148 127 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 PYYP10082 97 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 FCGR2BP31994 310 aaPredicted RBP14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 YPEL3P61236 119 aaPredicted RBP14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 ZNF491Q8N8L2 437 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 ZNF502Q8TBZ5 544 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 NIPSNAP3BQ9BS92 247 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 CTSGP08311 255 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 AKR1C3P42330 323 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 TMEM88Q6PEY1 159 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 OR5R1Q8NH85 324 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 RPUSD4Q96CM3 377 aaKnown RBP14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 MRPL27Q9P0M9 148 aaKnown RBP14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 HIGD1AQ9Y241 93 aa14.64□□□□□ -0.07
CHRNA4-203ENST00000467563 UBE2L3P68036 154 aaKnown RBP14.63□□□□□ -0.07
CHRNA4-203ENST00000467563 LEMD1Q68G75 181 aa14.63□□□□□ -0.07
CHRNA4-203ENST00000467563 IL17RELQ6ZVW7 336 aa14.63□□□□□ -0.07
CHRNA4-203ENST00000467563 TXN2Q99757 166 aa14.63□□□□□ -0.07
CHRNA4-203ENST00000467563 CHRDL1Q9BU40 450 aa14.63□□□□□ -0.07
CHRNA4-203ENST00000467563 PAXXQ9BUH6 204 aa14.63□□□□□ -0.07
CHRNA4-203ENST00000467563 C7orf77A4D0Y5 90 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 PDE6DO43924 150 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 PPIFP30405 207 aaKnown RBP14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 ADMP35318 185 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 ZNF674Q2M3X9 581 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 CBLN2Q8IUK8 224 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 TXNDC17Q9BRA2 123 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 PARLQ9H300 379 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 OR51M1Q9H341 326 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 WI2-2373I1.2A0A1W2PRP0 233 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 ZNF727A8MUV8 499 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 IL4P05112 153 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 KRTAP1-1Q07627 177 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 RNF125Q96EQ8 232 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 CCDC140Q96MF4 163 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 SMIM7Q9BQ49 75 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 SLC25A39Q9BZJ4 359 aaPredicted RBP14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 PRDM13Q9H4Q3 707 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 VPREB3Q9UKI3 123 aa14.62□□□□□ -0.07
CHRNA4-203ENST00000467563 GPR183P32249 361 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 FXYD5Q96DB9 178 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 TVP23CQ96ET8 276 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 RPS10P5Q9NQ39 176 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 ARL2-SNX15V9GYD0 113 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 ACANP16112 2415 aa14.61□□□□□ -0.07
CHRNA4-203ENST00000467563 SONP18583 2426 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms