RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 OR10J4P0C629 311 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 C1QTNF9P0C862 333 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 GCHFRP30047 84 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 PRR20EP86478 221 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 PRR20CP86479 221 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 PRR20DP86480 221 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 PRR20BP86481 221 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 PRR20AP86496 221 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 OR4C13Q8NGP0 309 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 OR5B3Q8NH48 314 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 ST6GALNAC6Q969X2 333 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 NDUFA4L2Q9NRX3 87 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 RALYQ9UKM9 306 aaKnown RBP9.75□□□□□ -0.85
COL27A1-202ENST00000451716 SLC45A2Q9UMX9 530 aa9.75□□□□□ -0.85
COL27A1-202ENST00000451716 CA7P43166 264 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
COL27A1-202ENST00000451716 SSX8Q7RTT4 187 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 TMEM37Q8WXS4 190 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 FAM110AQ9BQ89 295 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 TRBV24-1A0A075B6N3 115 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 CGB1A6NKQ9 187 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 PDE6DO43924 150 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 RHOBP62745 196 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 WT1-ASQ06250 92 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 VN1R17PQ8TDU5 208 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 KCNIP2Q9NS61 270 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 KAAG1Q9UBP8 84 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 TNFRSF18Q9Y5U5 241 aa9.74□□□□□ -0.85
COL27A1-202ENST00000451716 H0Y8G0 127 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 IGLV2-23P01705 113 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 ATP5J2P56134 94 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 FAM3BP58499 235 aaPredicted RBP9.73□□□□□ -0.85
COL27A1-202ENST00000451716 C19orf35Q6ZS72 473 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 ZNF586Q9NXT0 402 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 HIVEP3Q5T1R4 2406 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
COL27A1-202ENST00000451716 CNTFRP26992 372 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 C2orf83Q53S99 150 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 OR5B12Q96R08 314 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 UQCR10Q9UDW1 63 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 WASHC3Q9Y3C0 194 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 TOX4O94842 621 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 COX7A1P24310 79 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 PSG5Q15238 335 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 TMEM133Q9H2Q1 129 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 SRD5A3Q9H8P0 318 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 FUT9Q9Y231 359 aa9.73□□□□□ -0.85
COL27A1-202ENST00000451716 ESDP10768 282 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
COL27A1-202ENST00000451716 LGALS4P56470 323 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 ERHP84090 104 aaKnown RBP9.72□□□□□ -0.85
COL27A1-202ENST00000451716 CD69Q07108 199 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 AMMECR1LQ6DCA0 310 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 PDPNQ86YL7 162 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 FER1L6-AS1Q8NA97 138 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 IGFBPL1Q8WX77 278 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 FNDC4Q9H6D8 234 aaPredicted RBP9.72□□□□□ -0.85
COL27A1-202ENST00000451716 WNK2Q9Y3S1 2297 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 ADORA2A-AS1P86434 159 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 TMEM167AQ8TBQ9 72 aa9.72□□□□□ -0.85
COL27A1-202ENST00000451716 VENTXO95231 258 aa9.71□□□□□ -0.85
COL27A1-202ENST00000451716 PPOXP50336 477 aa9.71□□□□□ -0.85
COL27A1-202ENST00000451716 MORN5Q5VZ52 161 aa9.71□□□□□ -0.85
COL27A1-202ENST00000451716 RUSC1-AS1Q66K80 236 aa9.71□□□□□ -0.85
COL27A1-202ENST00000451716 HCP5Q6MZN7 132 aa9.71□□□□□ -0.85
COL27A1-202ENST00000451716 ZNF841Q6ZN19 808 aa9.71□□□□□ -0.85
COL27A1-202ENST00000451716 LINC00311Q8N616 119 aa9.71□□□□□ -0.85
COL27A1-202ENST00000451716 MRPL36Q9P0J6 103 aaKnown RBP9.71□□□□□ -0.85
COL27A1-202ENST00000451716 ZFYVE26Q68DK2 2539 aa9.71□□□□□ -0.85
COL27A1-202ENST00000451716 IGHV2-26A0A0B4J1V2 119 aa9.71□□□□□ -0.86
COL27A1-202ENST00000451716 ARL3P36405 182 aa9.71□□□□□ -0.86
COL27A1-202ENST00000451716 ZNF672Q499Z4 452 aaPredicted RBP9.71□□□□□ -0.86
COL27A1-202ENST00000451716 CCDC144NLQ6NUI1 221 aa9.71□□□□□ -0.86
COL27A1-202ENST00000451716 OCC1Q8TAD7 63 aa9.71□□□□□ -0.86
COL27A1-202ENST00000451716 ZNF503Q96F45 646 aa9.71□□□□□ -0.86
COL27A1-202ENST00000451716 SIGMAR1Q99720 223 aa9.71□□□□□ -0.86
COL27A1-202ENST00000451716 GEMIN7Q9H840 131 aaKnown RBP9.71□□□□□ -0.86
COL27A1-202ENST00000451716 IGHV3-21A0A0B4J1V1 117 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 TRAV5A0A0B4J249 113 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 K7EQM0 130 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 PAFAH1B2P68402 229 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 KLRB1Q12918 225 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 C5orf17Q8NAS9 161 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 NPIPB3Q92617 1050 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 UTP20O75691 2785 aaKnown RBP9.7□□□□□ -0.86
COL27A1-202ENST00000451716 A0A1W2PPI3 338 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 DLL1O00548 723 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 HYPMO75409 117 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 ZNF90Q03938 601 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 MRGPRG-AS1Q2M3A8 158 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 VSTM2AQ8TAG5 236 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 ANAPC16Q96DE5 110 aa9.7□□□□□ -0.86
COL27A1-202ENST00000451716 CDKN1AP38936 164 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 SPATA45Q537H7 98 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 FAM71F2Q6NXP2 309 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 OR2T10Q8NGZ9 312 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 UHRF2Q96PU4 802 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 PYGO2Q9BRQ0 406 aa9.69□□□□□ -0.86
COL27A1-202ENST00000451716 OR2T8A6NH00 312 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms