RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 EDN2P20800 178 aa12.92□□□□□ -0.34
COL7A1-202ENST00000422991 ADAMTSL5Q6ZMM2 481 aa12.92□□□□□ -0.34
COL7A1-202ENST00000422991 INO80EQ8NBZ0 244 aaPredicted RBP12.92□□□□□ -0.34
COL7A1-202ENST00000422991 Q8WTZ3 238 aa12.92□□□□□ -0.34
COL7A1-202ENST00000422991 ATP5SQ99766 215 aa12.92□□□□□ -0.34
COL7A1-202ENST00000422991 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
COL7A1-202ENST00000422991 SAP30O75446 220 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 OR2F1Q13607 317 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 C9orf66Q5T8R8 295 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 CYP2G1PQ6ZSU1 146 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 OR11H4Q8NGC9 324 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 OR51G1Q8NGK1 321 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 MGST2Q99735 147 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 GINS3Q9BRX5 216 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 SMIM3Q9BZL3 60 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 SIGLEC8Q9NYZ4 499 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 FBXL17Q9UF56 701 aa12.91□□□□□ -0.34
COL7A1-202ENST00000422991 WI2-2373I1.2A0A1W2PRP0 233 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 AGPAT2O15120 278 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 ARPC5O15511 151 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 WIPF1O43516 503 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 DFFBO76075 338 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 IL4P05112 153 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 FOLR2P14207 255 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 BTNL8Q6UX41 500 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 TMEM182Q6ZP80 229 aaPredicted RBP12.9□□□□□ -0.34
COL7A1-202ENST00000422991 MARC2Q969Z3 335 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 RNF125Q96EQ8 232 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 GPR61Q9BZJ8 451 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 WFDC1Q9HC57 220 aa12.9□□□□□ -0.34
COL7A1-202ENST00000422991 HMSDA8MTL9 139 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 MPDU1O75352 247 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 C8orf88P0DMB2 117 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 FGF7P21781 194 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 CBLN1P23435 193 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 GATA2P23769 480 aaPredicted RBP12.89□□□□□ -0.35
COL7A1-202ENST00000422991 CAMLGP49069 296 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 INSL3P51460 131 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 SELENOTP62341 195 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 USF2Q15853 346 aaPredicted RBP12.89□□□□□ -0.35
COL7A1-202ENST00000422991 BPIFCQ8NFQ6 507 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 SLC45A2Q9UMX9 530 aa12.89□□□□□ -0.35
COL7A1-202ENST00000422991 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
COL7A1-202ENST00000422991 CFDP00746 253 aaPredicted RBP12.88□□□□□ -0.35
COL7A1-202ENST00000422991 LYZP61626 148 aa12.88□□□□□ -0.35
COL7A1-202ENST00000422991 CD300CQ08708 224 aa12.88□□□□□ -0.35
COL7A1-202ENST00000422991 RAB31Q13636 194 aa12.88□□□□□ -0.35
COL7A1-202ENST00000422991 OPCMLQ14982 345 aa12.88□□□□□ -0.35
COL7A1-202ENST00000422991 OXLD1Q5BKU9 147 aa12.88□□□□□ -0.35
COL7A1-202ENST00000422991 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
COL7A1-202ENST00000422991 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
COL7A1-202ENST00000422991 MRPL27Q9P0M9 148 aaKnown RBP12.88□□□□□ -0.35
COL7A1-202ENST00000422991 IGLV1-51P01701 117 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 C1QBP02746 253 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 LINC00869P0C866 280 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 CRYBB3P26998 211 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 AP2S1P53680 142 aaPredicted RBP12.87□□□□□ -0.35
COL7A1-202ENST00000422991 ZNF345Q14585 488 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 METTL26Q96S19 204 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 PBDC1Q9BVG4 233 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
COL7A1-202ENST00000422991 MFFQ9GZY8 342 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 SMPXQ9UHP9 88 aa12.87□□□□□ -0.35
COL7A1-202ENST00000422991 DNAH3Q8TD57 4116 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 IGHV3-49A0A0A0MS15 119 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 G3V4G9 280 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 IFNA5P01569 189 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL7A1-202ENST00000422991 NPPCP23582 126 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 DYNLRB2Q8TF09 96 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 MLXQ9UH92 298 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 RABAC1Q9UI14 185 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 U3KQE9 123 aa12.86□□□□□ -0.35
COL7A1-202ENST00000422991 CHEK1O14757 476 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 APOHP02749 345 aaPredicted RBP12.85□□□□□ -0.35
COL7A1-202ENST00000422991 RPL29P47914 159 aaKnown RBP12.85□□□□□ -0.35
COL7A1-202ENST00000422991 EIF2B2P49770 351 aaKnown RBP12.85□□□□□ -0.35
COL7A1-202ENST00000422991 PLP1P60201 277 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 PRR20EP86478 221 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 PRR20CP86479 221 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 PRR20DP86480 221 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 PRR20BP86481 221 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 PRR20AP86496 221 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 ZNF266Q14584 549 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 MIC13Q5XKP0 118 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 KCNRGQ8N5I3 272 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 STPG3Q8N7X2 389 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 ST8SIA2Q92186 375 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 RHPN1-AS1Q9BWJ2 59 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 VSIRQ9H7M9 311 aa12.85□□□□□ -0.35
COL7A1-202ENST00000422991 TECRQ9NZ01 308 aaKnown RBP12.85□□□□□ -0.35
COL7A1-202ENST00000422991 IGHV3OR16-13A0A075B7E8 117 aa12.84□□□□□ -0.35
COL7A1-202ENST00000422991 IGHV3-74A0A0B4J1X5 117 aa12.84□□□□□ -0.35
COL7A1-202ENST00000422991 CXCL2P19875 107 aa12.84□□□□□ -0.35
COL7A1-202ENST00000422991 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
COL7A1-202ENST00000422991 DOK5Q9P104 306 aa12.84□□□□□ -0.35
COL7A1-202ENST00000422991 PXMP4Q9Y6I8 212 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms