RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ZNF705GA8MUZ8 300 aaPredicted RBP12.49□□□□□ -0.41
UFD1-202ENST00000399523 TOMM40O96008 361 aa12.49□□□□□ -0.41
UFD1-202ENST00000399523 CLEC2LP0C7M8 214 aa12.49□□□□□ -0.41
UFD1-202ENST00000399523 RD3LP0DJH9 198 aa12.49□□□□□ -0.41
UFD1-202ENST00000399523 HRH1P35367 487 aa12.49□□□□□ -0.41
UFD1-202ENST00000399523 AQP4P55087 323 aa12.49□□□□□ -0.41
UFD1-202ENST00000399523 UCP3P55916 312 aa12.49□□□□□ -0.41
UFD1-202ENST00000399523 CDPF1Q6NVV7 123 aa12.49□□□□□ -0.41
UFD1-202ENST00000399523 PLAC8L1A1L4L8 177 aa12.48□□□□□ -0.41
UFD1-202ENST00000399523 NUP62P37198 522 aaPredicted RBP12.48□□□□□ -0.41
UFD1-202ENST00000399523 HTR2BP41595 481 aa12.48□□□□□ -0.41
UFD1-202ENST00000399523 MXD1Q05195 221 aa12.48□□□□□ -0.41
UFD1-202ENST00000399523 FCN2Q15485 313 aa12.48□□□□□ -0.41
UFD1-202ENST00000399523 AMTNQ6UX39 209 aa12.48□□□□□ -0.41
UFD1-202ENST00000399523 Q6ZRN7 208 aaPredicted RBP12.48□□□□□ -0.41
UFD1-202ENST00000399523 OR4C16Q8NGL9 310 aa12.48□□□□□ -0.41
UFD1-202ENST00000399523 MDFICQ9P1T7 246 aa12.48□□□□□ -0.41
UFD1-202ENST00000399523 ISLRO14498 428 aa12.47□□□□□ -0.41
UFD1-202ENST00000399523 NXPH3O95157 252 aa12.47□□□□□ -0.41
UFD1-202ENST00000399523 AKR1C2P52895 323 aa12.47□□□□□ -0.41
UFD1-202ENST00000399523 TSPAN5P62079 268 aa12.47□□□□□ -0.41
UFD1-202ENST00000399523 OR51G1Q8NGK1 321 aa12.47□□□□□ -0.41
UFD1-202ENST00000399523 RNASEH2CQ8TDP1 164 aaKnown RBP12.47□□□□□ -0.41
UFD1-202ENST00000399523 GPR146Q96CH1 333 aa12.47□□□□□ -0.41
UFD1-202ENST00000399523 ABHD1Q96SE0 405 aa12.47□□□□□ -0.41
UFD1-202ENST00000399523 SSR3Q9UNL2 185 aa12.47□□□□□ -0.41
UFD1-202ENST00000399523 J3QL48 77 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 PSG1P11464 419 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 HLA-DMAP28067 261 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 FUSP35637 526 aaKnown RBP eCLIP12.46□□□□□ -0.412e-9■□□□□ 9
UFD1-202ENST00000399523 B2MP61769 119 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 AARDQ4LEZ3 155 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 NPIPB3Q92617 1050 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 ZNF586Q9NXT0 402 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 DOK5Q9P104 306 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 PFDN2Q9UHV9 154 aa12.46□□□□□ -0.41
UFD1-202ENST00000399523 CRXO43186 299 aaPredicted RBP12.45□□□□□ -0.42
UFD1-202ENST00000399523 ATG12O94817 140 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 RND3P61587 244 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 C2orf83Q53S99 150 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 OR8G2PQ6IF36 304 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 RNF125Q96EQ8 232 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 S100A16Q96FQ6 103 aaKnown RBP12.45□□□□□ -0.42
UFD1-202ENST00000399523 C17orf77Q96MU5 243 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 UHRF2Q96PU4 802 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 TP53RKQ96S44 253 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 RPRMQ9NS64 109 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 BLOC1S6Q9UL45 172 aa12.45□□□□□ -0.42
UFD1-202ENST00000399523 HMCN2Q8NDA2 5059 aa12.44□□□□□ -0.42
UFD1-202ENST00000399523 EBAG9O00559 213 aa12.44□□□□□ -0.42
UFD1-202ENST00000399523 SMR3BP02814 79 aaPredicted RBP12.44□□□□□ -0.42
UFD1-202ENST00000399523 AZU1P20160 251 aa12.44□□□□□ -0.42
UFD1-202ENST00000399523 LINC00315P59091 139 aa12.44□□□□□ -0.42
UFD1-202ENST00000399523 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
UFD1-202ENST00000399523 SPCS3P61009 180 aa12.44□□□□□ -0.42
UFD1-202ENST00000399523 C1orf194Q5T5A4 169 aa12.44□□□□□ -0.42
UFD1-202ENST00000399523 ETFRF1Q6IPR1 90 aa12.44□□□□□ -0.42
UFD1-202ENST00000399523 A0A0G2JRQ6 117 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 TMEM127O75204 238 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 INSP01308 110 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 ELK1P19419 428 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 SUPT4H1P63272 117 aaKnown RBP12.43□□□□□ -0.42
UFD1-202ENST00000399523 ESRGQ1W209 222 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 SLC24A4Q8NFF2 622 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 OR52E5Q8NH55 327 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 RXFP4Q8TDU9 374 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 TMEM170AQ8WVE7 144 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 C20orf173Q96LM9 149 aa12.43□□□□□ -0.42
UFD1-202ENST00000399523 MRPS16Q9Y3D3 137 aaKnown RBP12.43□□□□□ -0.42
UFD1-202ENST00000399523 FAM229AH3BQW9 127 aa12.42□□□□□ -0.42
UFD1-202ENST00000399523 EREGO14944 169 aa12.42□□□□□ -0.42
UFD1-202ENST00000399523 PRSS3P35030 304 aa12.42□□□□□ -0.42
UFD1-202ENST00000399523 SAMD13Q5VXD3 122 aa12.42□□□□□ -0.42
UFD1-202ENST00000399523 GNPNAT1Q96EK6 184 aaPredicted RBP12.42□□□□□ -0.42
UFD1-202ENST00000399523 ACY3Q96HD9 319 aa12.42□□□□□ -0.42
UFD1-202ENST00000399523 HEYLQ9NQ87 328 aaPredicted RBP12.42□□□□□ -0.42
UFD1-202ENST00000399523 M0R2Z0 102 aa12.41□□□□□ -0.42
UFD1-202ENST00000399523 ICAM4Q14773 271 aa12.41□□□□□ -0.42
UFD1-202ENST00000399523 SPINK13Q1W4C9 94 aa12.41□□□□□ -0.42
UFD1-202ENST00000399523 OR11H7Q8NGC8 314 aa12.41□□□□□ -0.42
UFD1-202ENST00000399523 NRG4Q8WWG1 115 aa12.41□□□□□ -0.42
UFD1-202ENST00000399523 RRNAD1Q96FB5 475 aaKnown RBP12.41□□□□□ -0.42
UFD1-202ENST00000399523 ZNF486Q96H40 463 aaPredicted RBP12.41□□□□□ -0.42
UFD1-202ENST00000399523 PBDC1Q9BVG4 233 aa12.41□□□□□ -0.42
UFD1-202ENST00000399523 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.42
UFD1-202ENST00000399523 C3orf85A0A1B0GTC6 90 aa12.4□□□□□ -0.42
UFD1-202ENST00000399523 IFNA5P01569 189 aa12.4□□□□□ -0.42
UFD1-202ENST00000399523 PIGPP57054 158 aa12.4□□□□□ -0.42
UFD1-202ENST00000399523 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
UFD1-202ENST00000399523 Q6ZSN1 163 aa12.4□□□□□ -0.42
UFD1-202ENST00000399523 GPX8Q8TED1 209 aa12.4□□□□□ -0.42
UFD1-202ENST00000399523 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.4□□□□□ -0.42
UFD1-202ENST00000399523 PGAM2P15259 253 aa12.39□□□□□ -0.43
UFD1-202ENST00000399523 PI3P19957 117 aa12.39□□□□□ -0.43
UFD1-202ENST00000399523 M6PRP20645 277 aa12.39□□□□□ -0.43
UFD1-202ENST00000399523 MEOX2P50222 304 aa12.39□□□□□ -0.43
UFD1-202ENST00000399523 CNN1P51911 297 aaKnown RBP12.39□□□□□ -0.43
UFD1-202ENST00000399523 OR5I1Q13606 314 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms