RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 IDI2-AS1Q9NZ38 188 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM27BQ5VT28 67 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 TMEM52Q8NDY8 209 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 KCNK17Q96T54 332 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 CYTL1Q9NRR1 136 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 DOPEY1Q5JWR5 2465 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 LINC01465Q8N7H1 131 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 LIFP15018 202 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 MALP21145 153 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 SNRPD3P62318 126 aaKnown RBP9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 C19orf48Q6RUI8 117 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 CCL8P80075 99 aa9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 PRRC2AP48634 2157 aaKnown RBP9.86□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A10PA6NDY2 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A18PA6NE21 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A16PA6NEW6 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A20PA6NIJ5 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A8PA6NJQ4 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A7PA6NKC0 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A22PA8MWA6 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A12PA8MX19 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A5PA8MXJ8 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A23PA8MXZ1 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A15PP0C7V4 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A13PP0C7W8 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A14PP0C7W9 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM90A24PP0C7X0 464 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 SUMO4Q6EEV6 95 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 ELSPBP1Q96BH3 223 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 NDUFC2O95298 119 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 BVES-AS1Q5T3Y7 98 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 RPRMLQ8N4K4 120 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 CRYBA2P53672 197 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 PPBPP02775 128 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 PPP1R27Q86WC6 154 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 C1QTNF5Q9BXJ0 243 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 PAX4O43316 350 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 DUX3Q96PT4 197 aa9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 BRCA1P38398 1863 aaKnown RBP9.85□□□□□ -0.83
SHROOM3-201ENST00000296043 NPIPB13A6NJU9 1138 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 NPIPB5A8MRT5 1133 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 TNRC6BQ9UPQ9 1833 aaKnown RBP9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 SPATA31B1PQ5VZV4 182 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 OR13A1Q8NGR1 328 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 ITLN1Q8WWA0 313 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 ZNF319Q9P2F9 582 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 WISP3O95389 354 aaPredicted RBP9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 TRAV1-1A0A0B4J248 108 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 ZC2HC1BQ5TFG8 222 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 FAM106CPP0CH98 169 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 C15orf53Q8NAA6 179 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 STRCQ7RTU9 1775 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 TRAV41A0A0B4J266 112 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 UNQ6494/PRO21346Q6UXR6 183 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 H3BMG7 143 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 TMEM74BQ9NUR3 256 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 CCL1P22362 96 aa9.84□□□□□ -0.83
SHROOM3-201ENST00000296043 SBF1O95248 1867 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 LEPROTO15243 131 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 FNDC10F2Z333 226 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 LILRA1O75019 489 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 SPTY2D1-AS1A0A0U1RR47 76 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 SAXO1Q8IYX7 474 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 AGMATQ9BSE5 352 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 FOXH1O75593 365 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 SLC25A48Q6ZT89 311 aaKnown RBP9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 ZNF721Q8TF20 911 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 IGLC2P0DOY2 106 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 IGLC3P0DOY3 106 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 OVOL2Q9BRP0 275 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 PLEKHB2Q96CS7 222 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 EFNB3Q15768 340 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 SLC25A47Q6Q0C1 308 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 AMTNQ6UX39 209 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 VWA8A3KMH1 1905 aa9.83□□□□□ -0.84
SHROOM3-201ENST00000296043 IL11RAQ14626 422 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 TMEM86BQ8N661 226 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 ASCL2Q99929 193 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 MESP1Q9BRJ9 268 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 NPPCP23582 126 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 JPT2Q9H910 190 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 TRAV17A0A0B4J275 112 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 C9JQL5 133 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 CD7P09564 240 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 TMEM131Q92545 1883 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 PHF7Q9BWX1 381 aaPredicted RBP9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 MGAMO43451 1857 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 C3orf36Q3SXR2 165 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 A0A1W2PPV9 198 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 SAP30O75446 220 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 IGKV1D-13A0A0B4J2D9 117 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 IGKV1-13P0DP09 117 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 APOBEC3AP31941 199 aaPredicted RBP9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 PLXNB3Q9ULL4 1909 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms